Hi Charles, Thanks for reaching out. Please ensure that you have built R with xz (lzma) support. If this does not resolve your problem, please post on support.bioconductor.org.
Michael On Thu, Sep 2, 2021 at 2:54 PM Charles Plessy <charles-listes+bioc-de...@plessy.org> wrote: > > Hello > > on my R 4.1.0 system, rtracklayer version 1.53.1 refuses to load > XZ-compressed GFF files, throwing the error "has unsupported type: > xzfile". As the function's manual page states that xz-compressed files > are handled transparently, I suppose it is a bug? > > Have a ncie day, > > Charles Plessy > > -- > Charles Plessy - - ~ ~ ~ ~ ~ ~~~~ ~ ~ ~ ~ ~ - - charles.ple...@oist.jp > Okinawa Institute of Science and Technology Graduate University > Staff scientist in the Luscombe Unit - ~ - https://groups.oist.jp/grsu > Toots from work - ~ ~~ ~ - https://mastodon.technology/@charles_plessy > > _______________________________________________ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel -- Michael Lawrence Principal Scientist, Director of Data Science and Statistical Computing Genentech, A Member of the Roche Group Office +1 (650) 225-7760 micha...@gene.com Join Genentech on LinkedIn | Twitter | Facebook | Instagram | YouTube _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
