Hi Witek,
Probably it is a false positive, caused by a commented VignetteEngine on
https://github.com/protViz/prozor/blob/master/vignettes/TargetDecoyFDR_Example.Rmd#L16
If you delete it (and the line below to be sure) I guess it will go away.
Best,
Lluís
On Fri, 19 Nov 2021 at 14:33, Witold Wolski <w...@fgcz.ethz.ch> wrote:
> Hi,
>
> I am getting the following error when running BiocCheck
> "ERROR: More than one VignetteEngine specified."
>
> But all the vignettes have the same
> %\VignetteEngine{knitr::rmarkdown}
>
> specified.
> Where else does BiocCheck look for vignetteEngine specification?
>
>
>
> Regards
> Witek
>
> PS. the code can be found here.
> https://github.com/protViz/prozor
>
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