Ubuntu and macOS errors are now fixed, but the palomino4/Windows error
is still there (this error is different), says, it needs OpenSSL.
Thanks in advance.
===========
Collecting package metadata (current_repodata.json): ...working...
Collecting package metadata (current_repodata.json): ...working...
failed
CondaSSLError: OpenSSL appears to be unavailable on this machine.
OpenSSL is required to
download and install packages.
Exception: HTTPSConnectionPool(host='conda.anaconda.org', port=443):
Max retries exceeded with url:
/conda-forge/win-64/current_repodata.json (Caused by SSLError("Can't
connect to HTTPS URL because the SSL module is not available."))
+ "C:/Users/biocbuild/AppData/Local/r-miniconda/condabin/conda.bat"
"create" "--yes" "--prefix"
"C:/Users/biocbuild/AppData/Local/r-miniconda/envs/r-reticulate"
"python=3.8" "numpy" "--quiet" "-c" "conda-forge"
failed
CondaSSLError: OpenSSL appears to be unavailable on this machine.
OpenSSL is required to
download and install packages.
Exception: HTTPSConnectionPool(host='conda.anaconda.org', port=443):
Max retries exceeded with url:
/conda-forge/win-64/current_repodata.json (Caused by SSLError("Can't
connect to HTTPS URL because the SSL module is not available."))
===========
Thanks and best,
Sarvesh
On Tue, 25 Oct 2022 at 22:05, Hervé Pagès <hpages.on.git...@gmail.com> wrote:
>
> Hi Sarvesh,
>
> It looks like reticulate somehow was using the wrong Python instance on
> nebbiolo2 and lconway, as reported by py_config().
>
> We're now setting RETICULATE_PYTHON on those machines to make sure that
> reticulate will use the correct Python. This change was made after the
> builds started today so it won't be reflected on tomorrow's report. But
> it should be reflected on Thursday's report.
>
> We'll do the same on the other build machines soon.
>
> Best,
>
> H.
>
> On 25/10/2022 08:53, Sarvesh Nikumbh wrote:
> > Hi Bioc-team,
> >
> > seqArchR was building fine, without any errors last week, but I am seeing
> > an error again. This time it is due to the Python module 'sklearn' not
> > available and one another error. The sklearn-related error occurs on
> > nebbiolo2 and Iconway, while palomino4 shows a different error.
> >
> > Maybe something changed on the build systems? Because these system
> > requirements were available before*.*
> >
> > Thanks and best,
> > Sarvesh
> >
> --
> Hervé Pagès
>
> Bioconductor Core Team
> hpages.on.git...@gmail.com
>
--
thanks!
-Sarvesh
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