Hi,

Installed the tbb-devel package!
The next build should be fine!

Thanks for the report!

Regards,
Martin

On Mon, Mar 10, 2025 at 1:39 PM Martin Grigorov <mgrigo...@apache.org>
wrote:

> Hi,
>
> I’ll check which package needs to be installed to provide libtbbmalloc!
>
> On Mon, 10 Mar 2025 at 13:19, Katja Danielzik <
> katja.daniel...@stud.uni-due.de> wrote:
>
>> Dear all,
>>
>> i have noticed that my package "MetaboDynamics" which employs stan
>> models ,that are pre-compiled to C++ during installation, fails to
>> install on kunpeng2 (and only there) with the following error message:
>>
>> /usr/bin/ld: cannot find -ltbbmalloc: No such file or directory
>> collect2: error: ld returned 1 exit status
>> make: *** [/home/biocbuild/R/R/share/make/shlib.mk:10:
>> MetaboDynamics.so] Error 1
>> ERROR: compilation failed for package ‘MetaboDynamics’
>> * removing
>> ‘/home/biocbuild/R/R-devel_2025-02-19/site-library/MetaboDynamics’
>>
>> The same error exists for the packages "IgGeneUsage" and "ClustIRR"
>> which also contain stan models that are compiled to C++.
>>
>> Might it be that the C++ compiler has an error or something is not
>> installed properly on the kunpeng2 VM?
>>
>> Best,
>>
>> Katja Danielzik
>>
>> --
>> PhD Student
>> AG Bioinformatics and Computational Biophysics
>> University of Duisburg-Essen
>> Tel: +49 201 183 4265
>> e-mail:katja.daniel...@uni-due.de
>>
>>         [[alternative HTML version deleted]]
>>
>> _______________________________________________
>> Bioc-devel@r-project.org mailing list
>> https://stat.ethz.ch/mailman/listinfo/bioc-devel
>>
>

        [[alternative HTML version deleted]]

_______________________________________________
Bioc-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/bioc-devel

Reply via email to