Hi Bodan -- "Bogdan Tanasa" <[EMAIL PROTECTED]> writes:
> Hi everyone, > > I am in the process of analyzing a lot of ChIP-seq data and I am writing to > ask > if an analysis module becomes available for R/Bioconductor anytime soon. Visit the bioc-sig-sequencing news group (Cc'd in the reply) https://stat.ethz.ch/mailman/listinfo/bioc-sig-sequencing Current packages include Biostrings (for lots of string matching / manipulation facilities) and ShortRead (for IO from ELAND or MAQ, for instance, plus additional sorting, counting, and qa-related functionality. There are posts in the bioc-sig-sequencing news group about package use. Maybe others will reply (to bioc-sig-sequencing) with additional developments; I know people are working with and developing packages for this data in R. Martin > Any information would be greatly appreciated. Thanks and best regards. > > Bogdan > > _______________________________________________ > Bioconductor mailing list > [EMAIL PROTECTED] > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: > http://news.gmane.org/gmane.science.biology.informatics.conductor -- Martin Morgan Computational Biology / Fred Hutchinson Cancer Research Center 1100 Fairview Ave. N. PO Box 19024 Seattle, WA 98109 Location: Arnold Building M2 B169 Phone: (206) 667-2793 _______________________________________________ Bioc-sig-sequencing mailing list [email protected] https://stat.ethz.ch/mailman/listinfo/bioc-sig-sequencing
