I thought MAQ had its own indel caller? João Fadista wrote:
Hi,I would like to know if there is any package (maybe ShortRead or Biostrings) that has some specific functions to call structural variations (CNVs and indels) in a genome given Solexa reads mapped by MAQ. Thanks in advance, João [[alternative HTML version deleted]] ------------------------------------------------------------------------ _______________________________________________ Bioc-sig-sequencing mailing list [email protected] https://stat.ethz.ch/mailman/listinfo/bioc-sig-sequencing
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