On Apr 24, 2009, at 12:45 , Thomas Girke wrote:
Thanks for pointing this out. I wasn't aware that such a fast 'SW
search'
option is now available. This will be very useful for many of my own
applications.
This is simply a consequence of the fact that SW can be pretty fast
when aligning against a small reference. It won't work in
'general' (say mammalian genomes).
Kasper
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