On Wed, Dec 9, 2009 at 3:26 AM, Purnachander <[email protected]> wrote: > Hello, > > I'm using "annotate" package to access articles from PUBMED. I found that I > can access articles only If I know PMID's. > > For E.g: >> id<-c("1939271" "2449431" "7729427" "7835343" "7836461" "7933101") >> x<-pubmed(id) > > Is it possible to search Pubmed with query terms like "RNA-seq", > "Metagenomics", etc.
As one possibility, see the NCBI eutils pages: http://eutils.ncbi.nlm.nih.gov/ Use RCurl to make the calls to eutils and the XML package to parse the results. Sean _______________________________________________ Bioc-sig-sequencing mailing list [email protected] https://stat.ethz.ch/mailman/listinfo/bioc-sig-sequencing
