Hi Martin, On Mon, Mar 8, 2010 at 4:12 AM, Martin Morgan <[email protected]> wrote: > In v. 0.1.40, ScanBamParam(tag=c("XX", "YY", "ZZ")) tells scanBam to > parse those fields, if they are encountered. Additional small test cases > welcome -- I do not have access to a very rich set of real tags.
Just tested it out, and it seems like it will work nicely. I also have a small set of flags I need, so have limited testing scenarios, but everything seems to be fine. If I run into any problems down the road, I'll provide specific examples. Thanks, -steve -- Steve Lianoglou Graduate Student: Computational Systems Biology | Memorial Sloan-Kettering Cancer Center | Weill Medical College of Cornell University Contact Info: http://cbio.mskcc.org/~lianos/contact _______________________________________________ Bioc-sig-sequencing mailing list [email protected] https://stat.ethz.ch/mailman/listinfo/bioc-sig-sequencing
