we are using PAM and BLOSUM matrices to calculate the score On 11/10/09, Satya Swarup Samal <[email protected]> wrote: > > Dear all, > > In sequence alignment algorithms e.g. Smith waterman or Needleman wunch, we > have match, mismatch and gap score while comparing two sequences. But how we > calculate these scores ? Is there any mathematical way or its just based on > trial and error ? > > Thanx in advance > > -- > Best Regards > Satya S. Samal > > -- > Dear Member, > > http://www.cbclickbank.com/biofriend/ > > Biofriend is now with great features. Like No email, catgorywise que & ans. > rating and much more visit biofriend and We are sure, You will definitely > like it. > > Ask your question Here ! > http://www.cbclickbank.com/biofriend/ > Get your Answers. > > Support Us to Help Others > > Biofriend India Team > > > Please visit this link & send your friends too > ========================================= > > " No email " visit > http://www.cbclickbank.com/bioinformatics/giudence.htm
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