* Nicholas Ingolia <n...@ingolia.org> [26.06.2012 19:57]: > Hi, > > I'm happy to produce conduit-based bindings for Samtools--it looks like it > would be pretty straightforward. I haven't used the library myself yet--I got > the sense that the interface may still be in flux and there is also a "pipes" > library to consider?
It woulud be nice if a single iteratee-based library would establish itself. Right now I was looking at what the reverse-dependency system said and conduit wins with 90 or so entries. Of course the whole yesod system counts for a lot of it. Regarding pipes, I seem to see some convergence going on with conduit. Otherwise 'pipes' seems a bit like a good idea but not enough people doing something with it. Kind of like with IterIO (nice tutorial of iter's in there). Regarding samtools: I do not need bindings immediately, but hope to have time for applications in this area toward the end of the year (can't call it "2nd half of 2012" anymore). So I would say, don't start writing a wrapper just now, wait a bit. > > As a note, I put my package repositories on github, which seemed like the > easiest way to make them generally accessible > https://github.com/ingolia/SamTools/ > https://github.com/ingolia/SeqLoc Awesome. Btw.: https://github.com/choener/ I like it, too ;-) Gruss, Christian > > Best, > --Nick > > On 26 Jun 2012, at 13:33 , Christian Hoener zu Siederdissen wrote: > > > Hi, > > > > it seems that the conduit package is used more often now and dependent > > packages maintained (just had a problem with iteratee-compress) better > > than with iteratee. > > > > Does this seem correct? > > > > Can I expect conduit to be the new standard in iteratee-based stuff? (At > > least for Biohaskell?) It seems that Felipe is using conduit, while > > Nicholas is maintaining enumerator+iteratee bindings? > > > > Finally, anybody (Felipe?) use conduit/list.zipSinks yet? > > > > Gruss, > > Christian > > _______________________________________________ > > Biohaskell mailing list > > Biohaskell@biohaskell.org > > http://malde.org/cgi-bin/mailman/listinfo/biohaskell >
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