On Mon, Oct 22, 2001 at 04:16:38PM -0400, Cox, Greg wrote:
> The use case I'm dealing with is translating 'n' (any DNA nucleotide,
> a,c,g,t) to 'n' (any RNA nucleotide, a,c,g,u). I'm not sure how to
> translate what you've outlined into code, could you expand a bit more.
>
> I won't commit anything until this gets straightened out.
surely the approach I gave, of individually translating
all the matches of an ambiguity symbol, then looking up
the appropriate symbol for the translated set, should work
nicely. In this case:
trans(n)
== trans([a c g t])
== [trans(a) trans(c) trans(g) trans(t)]
== [u g c a]
== n <now the RNA n>
Thomas
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