Hello, I got a problem with parsing Blast-result raport. When parsing the raport with BlastLikeSAXParser and my own written handler-class I get the queries after "Query="-string in endElement-method by finding them among all the text wich is produced in "Header"-part's "RawOutput-part". This works otherwise well but I can't get out the queries with "No hits". I think I've tried everything, but it seems that parser leaves out the "Header"-part's RawOutput-part of Blast-result document when there's no hits. Could anybody help?
I've tried to debug the problem. Is there easy way to make parser print the XML-document produced to file? I think I try that next and look what's produced. Is there easier way to get queries than finding them in "Header"-part after "Query=" text? Help me, please ;) -Petri Pehkonen- _______________________________________________ Biojava-l mailing list - [EMAIL PROTECTED] http://biojava.org/mailman/listinfo/biojava-l
