Yes, I should have mentioned that you'd need to move agave.dtd somewhere to integrate the code. Happy New Year!
Thanks, Brian -----Original Message----- From: Thomas Down [mailto:[EMAIL PROTECTED]] Sent: Saturday, December 22, 2001 11:09 AM To: Brian King Cc: [EMAIL PROTECTED] Subject: Re: [Biojava-l] AGAVE IO in BioJava On Thu, Dec 20, 2001 at 01:33:33PM -0800, Brian King wrote: > Yes, we'd be happy to see the BioJava AGAVE conversion code in the BioJava > CVS tree soon. Please do the initial checkin, and then let Hanning and > myself have an account so we can update it. Hi... I've now merged your contributions into the main BioJava tree. I've just picked up one minor issue -- now that the test cases are merged with the main BioJava test suite, they no longer run. I've traced this to the XML parser trying to resolve the external DTD subset (your test data just gives a system ID of "agave.dtd"), so the file has to be available in the current directory. Unless you've got any objections, I'll put the DTD under the resources/ tree, then add in a little EntityResolver so that Agave documents can pick it up automatically. I'm going to have fairly limited 'net access for the next week or so, but I'll get the code checked in ASAP when I get back post-holidays. Thanks, Thomas. _______________________________________________ Biojava-l mailing list - [EMAIL PROTECTED] http://biojava.org/mailman/listinfo/biojava-l
