Hi Mike, We don't have a CGI client for fetching genbank, embl or swissprot files. There have been more than a few requests for that functionality recently. There is a BioFetch client (org.biojava.bio.seq.db.biofetch), which may do what you need.
I'll take a look at porting Bio::DB::BenBank to BioJava this weekend. Matthew Michael E. Smoot wrote: > Hello, > > I'm currently thinking about transitioning a cgi script that uses > Bioperl's Bio::DB::GenBank code to a Java servlet to streamline a project > I'm working on. My question is whether BioJava provides a class or > classes that can accomplish the same thing as Bio::DB::GenBank? > Specifically, I'm looking for the ability to fetch a GenBank file from > NCBI given either an id or accession number. I've found the code to > parse these files, but not fetch them. > > > thanks, > Mike > > > _______________________________________________ > Biojava-l mailing list - [EMAIL PROTECTED] > http://biojava.org/mailman/listinfo/biojava-l > _______________________________________________ Biojava-l mailing list - [EMAIL PROTECTED] http://biojava.org/mailman/listinfo/biojava-l
