Hi Stephane,
Looks like a bug to me. It turns out it's my fault
from when first writing the code. Line 200 of
RemoteFeature.java has a == that should be a !=. Fixed
in cvs. Apologies.
Matthew
--- Stephane Marcel
<[EMAIL PROTECTED]> wrote: > Hi,
>
> when I read the doc of the Class
> RemoteFeature.Region I can see that :
>
> isRemote() should return true if the sequence is a
> remote sequence (a clone
> for example) and getSeqID() will return the ID of
> the remote sequence.
>
> But if I try this:
> for(Iterator i = regions.iterator(); i.hasNext(); )
> {
> RemoteFeature.Region region =
> (RemoteFeature.Region) i.next();
> System.out.println(
> region.getSeqID() + "\t" +
> region.isRemote() + "\t" +
> region.getLocation());
> }
> }
>
> on the folowing sequence:
> CDS
>
join(AL123465:123..567,363963..367351,368780..369208)
>
> I get this result:
> AL123465 false [123,567]
> null true [363963,367351]
> null true [368780,369208]
>
> Is it normal or the result should be:
> AL123465 true [123,567]
> null false [363963,367351]
> null false [368780,369208]
>
> If it is a bug, somebody can fix it?
>
> Thanks
>
> Stephane
>
>
>
>
>
> I
>
> _______________________________________________
> Biojava-l mailing list - [EMAIL PROTECTED]
> http://biojava.org/mailman/listinfo/biojava-l
__________________________________________________
Do You Yahoo!?
Everything you'll ever need on one web page
from News and Sport to Email and Music Charts
http://uk.my.yahoo.com
_______________________________________________
Biojava-l mailing list - [EMAIL PROTECTED]
http://biojava.org/mailman/listinfo/biojava-l
