Hello,
I have a problem when I try to execute the program PdbToXML. I think the problem is I
don't have the java.jar library, but where I can find it? (I have linux). I would be
very pleased you could help me.
The errors are the following (if you think the problem is not the java.jar library,
tell me please!):
[jon@diana ~]$ java PdbToXMLConverter 1FS1.pdb
Exception in thread "main" java.lang.NoClassDefFoundError: PdbToXMLConverter (wrong
name: org/biojava/bio/program/PdbToXMLConverter)
at java.lang.ClassLoader.defineClass0(Native Method)
at java.lang.ClassLoader.defineClass(ClassLoader.java:502)
at java.security.SecureClassLoader.defineClass(SecureClassLoader.java:123)
at java.net.URLClassLoader.defineClass(URLClassLoader.java:250)
at java.net.URLClassLoader.access$100(URLClassLoader.java:54)
at java.net.URLClassLoader$1.run(URLClassLoader.java:193)
at java.security.AccessController.doPrivileged(Native Method)
at java.net.URLClassLoader.findClass(URLClassLoader.java:186)
at java.lang.ClassLoader.loadClass(ClassLoader.java:299)
at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:265)
at java.lang.ClassLoader.loadClass(ClassLoader.java:255)
at java.lang.ClassLoader.loadClassInternal(ClassLoader.java:315)
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