[Biojava-l] question about ambiguous symbols

[dion . whitehead]

Hello,

I am having a frustrating time with attempting to read in rna sequences. They contain the 'N' symbol which is a standard ambiguity symbol, but the code trips up on this every time, saying its not a recognized symbol in the alphabet. Do I have to specify it myself?

Thanks, and keep up the good work,
dion
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