On Tuesday 11 Feb 2003 6:43 pm, Sylvain Foisy wrote: > Hi, > > I just notice something: the getName() method of a Sequence object does > not return the full line of comments of a FASTA-formatted file. For > example, a sequence has this comment line: > > gi|14776721|ref|NT_011516.5|Hs22_11673 Homo sapiens chromosome 22 > reference genomic contig > > but getName() returns: > > gi|14776721|ref|NT_011516.5|Hs22_11673 > > Is this a bug or a feature? I would like to have the full line so that I > can write a report after analysis. > Actually, that is the name by NCBI conventions :-).
If you used SeqIOTools, I think that will chuck the rest of the description into an Annotation under the key "description". Regards, David _______________________________________________ Biojava-l mailing list - [EMAIL PROTECTED] http://biojava.org/mailman/listinfo/biojava-l
