>>>>> "Vasa" == Vasa Curcin <[EMAIL PROTECTED]> writes:
Vasa> Is PDB file import working? Invoking:
Vasa> SequenceFormat sf =
Vasa> SeqIOTools.getSequenceFormat(SeqIOConstants.PDB);
Vasa> Returns:
Vasa> org.biojava.bio.BioException: No SequenceFormat available
Vasa> for format/alphabet identifier '524309'
Hi,
In this case the exception message is true - there really is no
SequenceFormat available for PDB. I don't think that there has ever
been one.
SeqIOConstants was designed to allow identifiers for any/all formats
so that an application could still refer to an unsupported format in a
defined way. I'm afraid that PDB falls into that category.
Keith
--
- Keith James <[EMAIL PROTECTED]> bioinformatics programming support -
- Pathogen Sequencing Unit, The Wellcome Trust Sanger Institute, UK -
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