Hi Andrew, Sequence variations would be a good thing to add. Could you post us the data that you think should be associated with a variation? That way we can work out if we need a new Feature interface and if the data should go into the Annotation bundle or should go into get/set methods.
Best, Matthew --- "Devereau Andrew (RW3) CM&MC Manchester" <[EMAIL PROTECTED]> wrote: > Hi, > > I am working on a project concerned with annotating > and archiving variations in DNA sequences, > especially pathogenic mutations. I have started > looking at BioJava, and from what I have seen so far > it should be possible to use a Feature to model a > variant in a Sequence. I am wondering though if > anyone has any experience of trying to do this, or > if there are specific classes produced to model > variants. > > Thanks, > > Andrew Devereau > > --- > Outgoing mail is certified Virus Free. > Checked by AVG anti-virus system > (http://www.grisoft.com). > Version: 6.0.510 / Virus Database: 307 - Release > Date: 14/08/2003 > > > _______________________________________________ > Biojava-l mailing list - [EMAIL PROTECTED] > http://biojava.org/mailman/listinfo/biojava-l ________________________________________________________________________ Want to chat instantly with your online friends? Get the FREE Yahoo! Messenger http://uk.messenger.yahoo.com/ _______________________________________________ Biojava-l mailing list - [EMAIL PROTECTED] http://biojava.org/mailman/listinfo/biojava-l
