Thanks for your quick respons Mark! I manage to get all the required sequences, but am having problems combining them (together with their features). Do you maybe know where I could find some example code of such 'joining' with the Edit functions?
Cheers, Daniel > Hi - > > We get asked this a lot. Unfortunately there isn't an easy solution. > If you have access to all of the files referenced in the main EMBL > file then you could write a simple program to retrieve and open them > all and then use something like Edit functions to join them together. > > - Mark > > > -----Original Message----- > From: Daniel Kiviet [mailto:[EMAIL PROTECTED] > Sent: Sat 18/10/2003 4:21 a.m. > To: [EMAIL PROTECTED] > Cc: > Subject: [Biojava-l] How to combine multiple Sequence objects into a > singleSequence object? > > > Hello, > > I'm trying to create a genome viewer by importing EMBL files using > the > SeqIOTools.readEmbl function. This gives me an iterator over the > sequences in the embl file. The embl files I am using are split up in > several sections within the embl file ('section 1 of 109 of the > complete genome' etc). > > Does anyone know how to combine multiple Sequence objects into a > single Sequence object? > > Thanks & best regards, > Daniel Kiviet > > > > -------------------- > Daniel Kiviet > ANU, Canberra ACT , Australia > > > _______________________________________________ > Biojava-l mailing list - [EMAIL PROTECTED] > http://biojava.org/mailman/listinfo/biojava-l > > > > ======================================================================= > Attention: The information contained in this message and/or > attachments from AgResearch Limited is intended only for the persons > or entities to > which it is addressed and may contain confidential and/or privileged > material. Any review, retransmission, dissemination or other use of, > or taking of any action in reliance upon, this information by persons > or entities other than the intended recipients is prohibited by > AgResearch Limited. If you have received this message in error, please > notify the sender immediately. > ======================================================================= -------------------- Daniel Kiviet Fenner Hall, ANU GPO Box 10 Canberra ACT 2601 Australia tel. +61 2 612 59224 mob. +61 4 036 86302 _______________________________________________ Biojava-l mailing list - [EMAIL PROTECTED] http://biojava.org/mailman/listinfo/biojava-l
