There seems to be some problem with serializing SequenceDB objects obtained from SwissProtDatabase. The error is:
java.io.WriteAbortedException: writing aborted; java.io.NotSeria
lizableException: org.biojava.bio.seq.io.SequenceBuilderBase$TemplateWithChildre
n
at java.io.ObjectInputStream.readObject0(ObjectInputStream.java:1278)
at java.io.ObjectInputStream.readObject(ObjectInputStream.java:324)
at java.util.HashSet.readObject(HashSet.java:272)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.
I am using Biojava 1.30, with Mark's patches from a few weeks back. Anyone has an idea?
Regards, Vasa
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