"Gang Wu" <[EMAIL PROTECTED]> wrote: > I got the following exceptions: > Exception in thread "main" org.biojava.bio.BioException: Error accessing > ontologies > Caused by: java.sql.SQLException: Base table or view not found, message > from server: "Table 'biosqldb.term_relationship_term' doesn't exist"
The BioJava Ontologies require an extra table in the schema, which isn't part of the official BioSQL (this should *really* be resolved, guys). A bit of searching on the archives will reveal more (I don't recall the details myself). It should also be possible to postpone creation of the core ontology until it's actually needed, since many applications don't use it at all (I've never used them). Cheers, Len. _______________________________________________ Biojava-l mailing list - [EMAIL PROTECTED] http://biojava.org/mailman/listinfo/biojava-l
