biojava-l  

Messages by Thread

• [Biojava-l] Alternative conformation skipped Enrico Morelli
  • Re: [Biojava-l] Alternative conformation skipped Jose Duarte
  • Re: [Biojava-l] Alternative conformation skipped Enrico Morelli
• [Biojava-l] How to find Pubmed ID Enrico Morelli
  • Re: [Biojava-l] How to find Pubmed ID Jose Duarte
  • Re: [Biojava-l] How to find Pubmed ID Enrico Morelli
  • Re: [Biojava-l] How to find Pubmed ID Jose Duarte
• [Biojava-l] Updating the Cookbook (Resend) Gary Murphy
  • Re: [Biojava-l] Updating the Cookbook (Resend) Peter Cock
  • Re: [Biojava-l] Updating the Cookbook (Resend) Gary Murphy
  • Re: [Biojava-l] Updating the Cookbook (Resend) Jose Duarte
  • Re: [Biojava-l] Updating the Cookbook (Resend) Gary Murphy
• [Biojava-l] Atom neighbors Enrico Morelli
  • Re: [Biojava-l] Atom neighbors Jose Duarte
• [Biojava-l] Avoid PDB folder structure creation Enrico Morelli
  • Re: [Biojava-l] Avoid PDB folder structure creation Jose Duarte
• [Biojava-l] Chain order Enrico Morelli
  • Re: [Biojava-l] Chain order Jose Duarte
  • Re: [Biojava-l] Chain order Enrico Morelli
  • Re: [Biojava-l] Chain order #AMR ALI MOKHTAR ALHOSSARY#
  • Re: [Biojava-l] Chain order Enrico Morelli
  • Re: [Biojava-l] Chain order Enrico Morelli
• [Biojava-l] DNS changes for Bio*.org domains Peter Cock
  • Re: [Biojava-l] DNS changes for Bio*.org domains Peter Cock
• [Biojava-l] Regarding in issue on the openchart not found in biojava 6.0.4 Roshan Shrestha
  • Re: [Biojava-l] Regarding in issue on the openchart not found in biojava 6.0.4 Jose Duarte
  • Re: [Biojava-l] Regarding in issue on the openchart not found in biojava 6.0.4 Nadeem Shakya
  • Re: [Biojava-l] Regarding in issue on the openchart not found in biojava 6.0.4 Francisco José Peñarrubia
  • Re: [Biojava-l] Regarding in issue on the openchart not found in biojava 6.0.4 Nadeem Shakya
  • Re: [Biojava-l] Regarding in issue on the openchart not found in biojava 6.0.4 Francisco José Peñarrubia
• [Biojava-l] Query: Regarding Log4Shell Patch Updates In Biojava Nadeem Shakya
  • Re: [Biojava-l] Query: Regarding Log4Shell Patch Updates In Biojava Jose Duarte
  • Re: [Biojava-l] Query: Regarding Log4Shell Patch Updates In Biojava Nadeem Shakya
• [Biojava-l] Status of the project? Richard Adams
  • Re: [Biojava-l] Status of the project? Michael Heuer
  • Re: [Biojava-l] Status of the project? Jose Duarte
• RES: [Biojava-l] Alignmente algorithms implemented by BioJava Anderson Moura da Silva
• [Biojava-l] Alignmente algorithms implemented by BioJava Anderson Moura da Silva
  • Re: [Biojava-l] Alignmente algorithms implemented by BioJava Sylvain Foisy
  • Re: [Biojava-l] Alignmente algorithms implemented by BioJava Dickson S. Guedes
• [Biojava-l] Problem: Hibernate - RichSequence Annotation Felix Dreher
  • Re: [Biojava-l] Problem: Hibernate - RichSequence Annotation mark . schreiber
  • Re: [Biojava-l] Problem: Hibernate - RichSequence Annotation Felix Dreher
• [Biojava-l] structureNMRImpl Tamas Horvath
  • [Biojava-l] Re: structureNMRImpl Tamas Horvath
• [Biojava-l] BiojavaX EmblFormat Jolyon Holdstock
  • Re: [Biojava-l] BiojavaX EmblFormat mark . schreiber
• [Biojava-l] odds ratio wendy wong
  • Re: [Biojava-l] odds ratio mark . schreiber
  • Re: [Biojava-l] odds ratio wendy wong
• [Biojava-l] Unleashed Informatics Supports DogBox Online Community Unleashed Informatics Administration
• [Biojava-l] SeqHound User Support Unleashed Informatics Administration
• [Biojava-l] problems with SubIntegerAlphabet Heather Kent
  • Re: [Biojava-l] problems with SubIntegerAlphabet mark . schreiber
  • Re: [Biojava-l] problems with SubIntegerAlphabet mark . schreiber
• [Biojava-l] BioJavaX docbook minor corrections Felix Dreher
  • Re: [Biojava-l] BioJavaX docbook minor corrections mark . schreiber
• [Biojava-l] BioSQLRichSequenceDB: initialisation error Felix Dreher
  • Re: [Biojava-l] BioSQLRichSequenceDB: initialisation error mark . schreiber
  • Re: [Biojava-l] BioSQLRichSequenceDB: initialisation error mark . schreiber
• [Biojava-l] last call for logos mark . schreiber
• [Biojava-l] release plan mark . schreiber
• [Biojava-l] RichAnnotation mark . schreiber
• [Biojava-l] Problem: BioSQL-cvs and/or RichSequence-Annotation Felix Dreher
  • Re: [Biojava-l] Problem: BioSQL-cvs and/or RichSequence-Annotation mark . schreiber
  • Re: [Biojava-l] Problem: BioSQL-cvs and/or RichSequence-Annotation Felix Dreher
  • Re: [Biojava-l] Problem: BioSQL-cvs and/or RichSequence-Annotation mark . schreiber
• [Biojava-l] Contributers mark . schreiber
• [Biojava-l] Genbank parser error [biojavax] Morgane THOMAS-CHOLLIER
  • Re: [Biojava-l] Genbank parser error [biojavax] mark . schreiber
  • [Biojava-l] [ANN] VTD-XML Version 1.5 Released Jimmy Zhang
  • Re: [Biojava-l] Genbank parser error [biojavax] Morgane THOMAS-CHOLLIER
  • Re: [Biojava-l] Genbank parser error [biojavax] Morgane THOMAS-CHOLLIER
  • Re: [Biojava-l] Genbank parser error [biojavax] mark . schreiber
  • Re: [Biojava-l] Genbank parser error [biojavax] Morgane THOMAS-CHOLLIER
  • Re: [Biojava-l] Genbank parser error [biojavax] mark . schreiber
  • Re: [Biojava-l] Genbank parser error [biojavax] Morgane THOMAS-CHOLLIER
• [Biojava-l] Persist SingleDP object Martin Eklund
  • Re: [Biojava-l] Persist SingleDP object mark . schreiber
• [Biojava-l] easy createRichSequence methods mark . schreiber
• [Biojava-l] BioJavaX-Hibernate: Namespace problem Felix Dreher
  • Re: [Biojava-l] BioJavaX-Hibernate: Namespace problem mark . schreiber
• Re: [Biojava-l] Looking for a RandomAccessFile-like class for sequences mark . schreiber
• [Biojava-l] Looking for a RandomAccessFile-like class for sequences Todd Riley
• [Biojava-l] Is FullHmmerProfileHMM (or FlatModel) Broken? Todd Riley
• [Biojava-l] MacResearch announces iPod giveaway contest Joel Dudley
• [Biojava-l] warnings, errors, comments Tamas Horvath
• [Biojava-l] BioJava wiki mark . schreiber
• [Biojava-l] BioJava News site mark . schreiber
• [Biojava-l] Newbie struggling with secondary structure Tjaart de Beer
  • Re: [Biojava-l] Newbie struggling with secondary structure Andreas Prlic
  • Re: [Biojava-l] Newbie struggling with secondary structure Martin Heusel
  • Re: [Biojava-l] Newbie struggling with secondary structure Tjaart de Beer
  • Re: [Biojava-l] Newbie struggling with secondary structure Tamas Horvath
• [Biojava-l] Need a slogan for OBF Shameer Khadar
  • [Biojava-l] OBF - logo+slogan sample Shameer Khadar
• [Biojava-l] Re:biojava wikimedia based home page foisys
• [Biojava-l] biojava wikimedia based home page mark . schreiber
  • Re: [Biojava-l] biojava wikimedia based home page sylvain . foisy
  • [Biojava-l] Re: [Biojava-dev] biojava wikimedia based home page Dickson S. Guedes
  • Re: [Biojava-l] biojava wikimedia based home page Egon Willighagen
• [Biojava-l] concatenating chromatograms Heather Kent
  • Re: [Biojava-l] concatenating chromatograms Russ Kepler
  • Re: [Biojava-l] concatenating chromatograms Andy Yates
  • Re: [Biojava-l] concatenating chromatograms mark . schreiber
  • [Biojava-l] from C alpha trace to full co-ordinates Shameer Khadar
• Re: [Biojava-l] Help needed to add "Number of Bits" vertical and column number labeling to DistributionLogos mark . schreiber
• Re: [Biojava-l] Help needed tp add "Number of Bits" vertical and column number labeling to DistributionLogos mark . schreiber
• [Biojava-l] Alignment with GAPs Dickson S. Guedes
  • Re: [Biojava-l] Alignment with GAPs Matthew Pocock
  • Re: [Biojava-l] Alignment with GAPs Dickson S. Guedes
  • [Biojava-l] Help needed tp add "Number of Bits" vertical and column number labeling to DistributionLogos Todd Riley
  • Re: [Biojava-l] Alignment with GAPs mark . schreiber
  • Re: [Biojava-l] Alignment with GAPs Dickson S. Guedes
  • Re: [Biojava-l] Alignment with GAPs mark . schreiber
• [Biojava-l] Bioinformatics Programmer Position in Singapore Wayne Mitchell
• [Biojava-l] BioSQL cvs versions Felix Dreher
  • Re: [Biojava-l] BioSQL cvs versions Janko Diminic
  • Re: [Biojava-l] BioSQL cvs versions mark . schreiber
  • Re: [Biojava-l] BioSQL cvs versions Felix Dreher
  • Re: [Biojava-l] BioSQL cvs versions mark . schreiber
• [Biojava-l] Parse XML BLAST Christian Köberle
  • Re: [Biojava-l] Parse XML BLAST mark . schreiber
• [Biojava-l] Re: Multiple questions (mark.schrei...@novartis.com) Franck
• [Biojava-l] strange pdb Tamas Horvath
  • [Biojava-l] Re: strange pdb Tamas Horvath
  • Re: [Biojava-l] Re: strange pdb Andreas Prlic
• Re: [Biojava-l] getting involved mark . schreiber
  • Re: [Biojava-l] getting involved Simon Rouane
• [Biojava-l] Sort Features Christian Köberle
  • Re: [Biojava-l] Sort Features Thomas Down
  • [Biojava-l] getting involved Simon Rouane
• [Biojava-l] Generalized HMM in biojava? wendy wong
  • Re: [Biojava-l] Generalized HMM in biojava? mark . schreiber
  • Re: [Biojava-l] Generalized HMM in biojava? wendy wong
  • Re: [Biojava-l] Generalized HMM in biojava? Matthew Pocock
  • Re: [Biojava-l] Generalized HMM in biojava? wendy wong
  • Re: [Biojava-l] Generalized HMM in biojava? Matthew Pocock
  • Re: [Biojava-l] Generalized HMM in biojava? wendy wong
  • Re: [Biojava-l] Generalized HMM in biojava? Matthew Pocock
  • Re: [Biojava-l] Generalized HMM in biojava? wendy wong
  • Re: [Biojava-l] Generalized HMM in biojava? Matthew Pocock
• [Biojava-l] tiny problem with converting java 1.5 to 1.4 Dr. Christoph Gille
• [Biojava-l] amino acid to nucleic acid alignment Alex Golubev
  • Re: [Biojava-l] amino acid to nucleic acid alignment David Huen
• RE: [Biojava-l] Embl parser problem[Scanned] Jolyon Holdstock
  • RE: [Biojava-l] Embl parser problem[Scanned] mark . schreiber
  • RE: [Biojava-l] Embl parser problem[Scanned] Jolyon Holdstock
  • Re: [Biojava-l] Embl parser problem[Scanned] Thomas Down
  • RE: [Biojava-l] Embl parser problem[Scanned] mark . schreiber
  • RE: [Biojava-l] Embl parser problem[Scanned] Jolyon Holdstock
• [Biojava-l] Embl parser problem Jolyon Holdstock
  • Re: [Biojava-l] Embl parser problem mark . schreiber
• [Biojava-l] Is there any Parser for "rnamotif" output? Premkumar Natarajan
• [Biojava-l] [OT] Bioinformatician job vacancy Smithies, Russell
• [Biojava-l] Gapping Sequence problems Dan Cardin
  • RE: [Biojava-l] Gapping Sequence problems Richard HOLLAND
  • Re: [Biojava-l] Gapping Sequence problems mark . schreiber
• Re: [Biojava-l] Locating promoter regions in sequence of DNA with Biojava mark . schreiber
• [Biojava-l] Locating promoter regions in sequence of DNA with Biojava Ilueny Santos
• [Biojava-l] Sequence Iteration in BioJava(x) Mark Fortner
  • Re: [Biojava-l] Sequence Iteration in BioJava(x) David Huen
  • RE: [Biojava-l] Sequence Iteration in BioJava(x) Richard HOLLAND
  • Re: [Biojava-l] Sequence Iteration in BioJava(x) Mark Fortner
  • Re: [Biojava-l] Sequence Iteration in BioJava(x) David Huen
  • Re: [Biojava-l] Sequence Iteration in BioJava(x) Matthew Pocock
  • RE: [Biojava-l] Sequence Iteration in BioJava(x) mark . schreiber
  • RE: [Biojava-l] Sequence Iteration in BioJava(x) Richard HOLLAND
  • Re: [Biojava-l] Sequence Iteration in BioJava(x) mark . schreiber
  • Re: [Biojava-l] Sequence Iteration in BioJava(x) Mark Fortner
  • Re: [Biojava-l] Sequence Iteration in BioJava(x) mark . schreiber
• [Biojava-l] somebody can help me? Ilueny Santos
  • Re: [Biojava-l] somebody can help me? mark . schreiber
• [Biojava-l] BLAST (ncbi-blast, wu-blast, web-blast) Dr. Christoph Gille
• [Biojava-l] SAXException with BLAST errors W. Eric Trull
  • Re: [Biojava-l] SAXException with BLAST errors mark . schreiber
  • Re: [Biojava-l] SAXException with BLAST errors W. Eric Trull
  • Re: [Biojava-l] SAXException with BLAST errors W. Eric Trull
• [Biojava-l] Restriction mapping for the whole chromosome sequence Ilhami Visne
  • Re: [Biojava-l] Restriction mapping for the whole chromosome sequence mark . schreiber
• [Biojava-l] gromacs shell script Tamas Horvath
  • Re: [Biojava-l] gromacs shell script Thomas Down
  • Re: [Biojava-l] gromacs shell script Tamas Horvath
  • Re: [Biojava-l] gromacs shell script Tamas Horvath
• [Biojava-l] Hit_def from blast xml output? Michael E. Smoot
  • Re: [Biojava-l] Hit_def from blast xml output? mark . schreiber
• [Biojava-l] parsePDB Tamas Horvath
  • Re: [Biojava-l] parsePDB Andreas Prlic
• [Biojava-l] 3d structure rotation code Tamas Horvath
• [Biojava-l] abi2xml a new parser of abi trace files Erik Sjölund
• [Biojava-l] cvs ant build failure Tamas Horvath
  • Re: [Biojava-l] cvs ant build failure Francois Pepin
  • RE: [Biojava-l] cvs ant build failure Richard HOLLAND
  • Re: [Biojava-l] cvs ant build failure Andreas Prlic
  • RE: [Biojava-l] cvs ant build failure mark . schreiber
  • RE: [Biojava-l] cvs ant build failure Richard HOLLAND
• RE: [Biojava-l] cvs downlod install Richard HOLLAND
• [Biojava-l] 1.4 vs 1.5 Dr. Christoph Gille
• Re: [Biojava-l] cvs download mark . schreiber
• Re: [Biojava-l] BaumWelchTrainer Broken??!!! (please help) mark . schreiber

• Earlier messages