Hi,
[EMAIL PROTECTED] wrote:
I followed the instructions on how to install BioJava and the jar files. I tried the code 'How
can I make a motif into a regular expression' and get the error message that the compiler
cannot locate the package java.util.regex. Where should this package be located since I
don't seem to have it?
What version of Java are you using? I believe that java.util.regex is
included in Java 1.4 and 1.5 (or is that now Java 5? Can't keep up). I
think BioJava 1.3 was the last release that we coded to Java 1.3.
I also tried one of the demos from the package indexing, ListIDs. It compiled ok but
running was terminated by ArrayIndexOutOfBoundsException. Are the demos expecting
some parameter input since this happened with others as well? the code is not that
explicit without comments for a beginner.
Could you post the stack trace? It's difficult to know what is going
wrong without it. Sory that the code is not well documented. It tends to
be the last thing that gets done.
Matthew
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