Hello everyone, We are trying to parse a quite large multiple BLAST results file (around 4GB), and the computer available has 1GB of RAM. However, when the code in the cookbook is used ( "http://www.biojava.org/docs/bj_in_anger/BlastParser.htm";), using the BlastLikeSAXParser it will give out an OutOfMemory exception after a short while, and when I monitor the system during the parsing, I don't see the memory usage going up significantly. It is the parse(InputSource) method that throws the exception. Is there a way to solve this problem ?
Thanks, Can _______________________________________________ Biojava-l mailing list - [EMAIL PROTECTED] http://biojava.org/mailman/listinfo/biojava-l
