To do a six frame translation have a look at:
http://www.biojava.org/docs/bj_in_anger/sixframetranslate.html
Rahul Karnik <[EMAIL PROTECTED]>
Sent by: [EMAIL PROTECTED]
06/27/2005 01:36 PM
To: Michael Tran <[EMAIL PROTECTED]>
cc: [email protected], (bcc: Mark Schreiber/GP/Novartis)
Subject: Re: [Biojava-l] Nucleotide translation
Michael Tran wrote:
> I'm looking for a Class file that can translate a nucleotide sequence
into its 6 reading frames and then into protein.
> I'm finding the BioJava API difficult to navigate.
http://www.biojava.org/docs/bj_in_anger/Translation.htm
In general, for help with BioJava, you should first look at the BioJava
in Anger site at http://www.biojava.org/docs/bj_in_anger/.
Hope that helps,
Rahul
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