Hi Tamas,
In case you are working with a PDB file that is located
somewhere on your hard disk, you could use the code from below
to parse it in.
Cheers,
Andreas
String filename = "path/to/pdbfile.ent" ;
PDBFileReader pdbreader = new PDBFileReader();
try{
Structure struc = pdbreader.getStructure(filename);
System.out.println(struc);
} catch (Exception e) {
e.printStackTrace();
}
On 29 Nov 2005, at 16:25, Tamas Horvath wrote:
I've got an ArrayList<String> object containing a PDB file's
information.How may I feed it to the structure parser? As far as I
could see, it onlyaccepts BufferdReader or imputStream...
----------------------------------------------------------------------
Andreas Prlic Wellcome Trust Sanger Institute
Hinxton, Cambridge CB10 1SA, UK
+44 (0) 1223 49 6891
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