The link you give is the tutorial. The broken links would normally link to two example XML files, there's nothing in those files which tell you how to parse them.
You will notice that the tutorial specifies an example application in the demos directory of the BioJava distribution. The source code of this example application is provided with BioJava (or if you can't find it, check out the latest copy of the source from CVS). Reading the source code should be enough to work out how it works - although if you'd like to write a better tutorial on the subject and contribute it back, that would be very much appreciated! cheers, Richard. PS. NOTE: to the person who converted the Blast2HTML tutorial, can you fix the two broken links to the example blastp and blastn input files please? Thanks! On Tue, 2006-06-27 at 13:36 +0200, David Bourgais wrote: > Ok, I prefer to change my question. > I would like to convert a Blast output in XML into a HTML file. > In the BioJava website, I noticed this link : > http://www.biojava.org/wiki/BioJava:Tutorial:Blast2HTML_Example_Application > But, the two links in the introduction are not correct. > So, is there any tutorial to convert a Blast XML into a HTML file ? > > Thank you very much for answer. > > Regards. > > David > > _______________________________________________ > Biojava-l mailing list - [email protected] > http://lists.open-bio.org/mailman/listinfo/biojava-l -- Richard Holland (BioMart Team) EMBL-EBI Wellcome Trust Genome Campus Hinxton Cambridge CB10 1SD UNITED KINGDOM Tel: +44-(0)1223-494416 _______________________________________________ Biojava-l mailing list - [email protected] http://lists.open-bio.org/mailman/listinfo/biojava-l
