Thanks Andy, I programmatically set the proxy however, it still does not solve the problem.
On 8/31/06, Andy Yates <[EMAIL PROTECTED]> wrote: > > That sounds like http proxy problems in my book. > > Try looking at this page: http://mindprod.com/jgloss/proxy.html > > The main thing to take home is try setting the system properties: > > proxySet=true > http.proxyHost=proxyHostName > http.proxyPort=proxyHostPort > > You can do this programatically using the System.setProperty() method or > with -DpropertyName=propertyValue from the command line. > > Hope that helps, > > Andy Yates > > [EMAIL PROTECTED] wrote: > > Hi - > > > > This sounds very strange. Is there any stack trace? Could you possibly > > post the code that recreates the problem? > > > > - Mark > > > > > > > > > > > > "K.R. Carter" <[EMAIL PROTECTED]> > > Sent by: [EMAIL PROTECTED] > > 08/31/2006 04:34 AM > > Please respond to kikia.reneese > > > > > > To: [email protected] > > cc: (bcc: Mark Schreiber/GP/Novartis) > > Subject: [Biojava-l] SCF file wont load from URL > > > > > > Hello, > > > > I am trying to load an scf file by using the input stream from a url and > > it > > will not load. Does anyone know what might be happening? My program > doesnt > > give an error, it just completely freezes. I am using the latest ( i > > think) > > version of SCF class. > > > > > > /** > > * A [EMAIL PROTECTED] org.biojava.bio.chromatogram.Chromatogram} as loaded > > from an > > * SCF v2 or v3 file. Also loads and exposes the SCF format's "private > > data" > > * and "comments" sections. The quality values from the SCF are stored > as > > * additional sequences on the base call alignment. The labels are the > > * <code>PROB_</code>* constants in this class. > > * The values are [EMAIL PROTECTED] > > org.biojava.bio.symbol.IntegerAlphabet.IntegerSymbol} > > * objects in the range 0 to 255. > > * > > * > > * @author Rhett Sutphin (<a href="http://genome.uiowa.edu/";>UI > CBCB</a>) > > */ > > > > any help would be greatly appreciated. > > > > Thanks! > > _______________________________________________ > > Biojava-l mailing list - [email protected] > > http://lists.open-bio.org/mailman/listinfo/biojava-l > > > > > > > > _______________________________________________ > > Biojava-l mailing list - [email protected] > > http://lists.open-bio.org/mailman/listinfo/biojava-l > > > _______________________________________________ Biojava-l mailing list - [email protected] http://lists.open-bio.org/mailman/listinfo/biojava-l
