Hi -
This sounds very strange. Is there any stack trace? Could you possibly
post the code that recreates the problem?
- Mark
"K.R. Carter" <[EMAIL PROTECTED]>
Sent by: [EMAIL PROTECTED]
08/31/2006 04:34 AM
Please respond to kikia.reneese
To: [email protected]
cc: (bcc: Mark Schreiber/GP/Novartis)
Subject: [Biojava-l] SCF file wont load from URL
Hello,
I am trying to load an scf file by using the input stream from a url and
it
will not load. Does anyone know what might be happening? My program doesnt
give an error, it just completely freezes. I am using the latest ( i
think)
version of SCF class.
/**
* A [EMAIL PROTECTED] org.biojava.bio.chromatogram.Chromatogram} as loaded
from an
* SCF v2 or v3 file. Also loads and exposes the SCF format's "private
data"
* and "comments" sections. The quality values from the SCF are stored as
* additional sequences on the base call alignment. The labels are the
* <code>PROB_</code>* constants in this class.
* The values are [EMAIL PROTECTED]
org.biojava.bio.symbol.IntegerAlphabet.IntegerSymbol}
* objects in the range 0 to 255.
*
*
* @author Rhett Sutphin (<a href="http://genome.uiowa.edu/";>UI CBCB</a>)
*/
any help would be greatly appreciated.
Thanks!
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