Hello all,
I would like to pose again a question regarding multiple sequence alignment
with profile HMMs. Any help would be deeply appreciated.
i created a profile hmm from a set of unaligned homologues sequences then
i aligned some sequences to the model.i noticed that every sequence has
its own length for the alignment.is there any method by which i can create
a multiple sequence alignment between these sequences?
thanks in advance,
ckol
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