Like any other Java software, you need to have all the BioJava jars on your classpath to run it from the command line. If you want to avoid having to do that, you can copy the jars into $JAVA_HOME/ext.
Please read Sun's documentation on the Java programming language to learn more about the classpath. Richard Anant Jain wrote: > Greetings all, > > Do we have any BioJava runtime eviorment like jre coz > if i give a s/w to anybody then he also include all the jar files in his > class path. > > If i am compile and run my biojava program from my editplus then its working > but if i run it from command prompt then its giving error like unable to > load PDBFilereader.class. plz tel me how to run our program through cmd > _______________________________________________ > Biojava-l mailing list - [email protected] > http://lists.open-bio.org/mailman/listinfo/biojava-l > -- Richard Holland, BSc MBCS Finance Director, Eagle Genomics Ltd T: +44 (0)1223 654481 ext 3 | E: [email protected] http://www.eaglegenomics.com/ _______________________________________________ Biojava-l mailing list - [email protected] http://lists.open-bio.org/mailman/listinfo/biojava-l
