Hi - If you wish to contribute the code you could give it to someone with a development account (Andreas Prilc might be the best option). Alternatively if you think you will be regularly contributing you could apply for a development account.
Because fjoin works on features and locations and as BioJava already has a detailed location model it would be good if your code makes use of the BioJava location/ feature API (at least in the public interface). - Mark [email protected] wrote on 03/24/2009 08:51:49 PM: > Hi there at BioJava, > > I have implemented an algorithm in Java for efficient computation of feature > overlap (fjoin algorithm: described in > http://www.liebertonline.com/doi/abs/10.1089/cmb.2006.13.1457 and the actual > paper here http://www.liebertonline.com/doi/pdf/10.1089/cmb.2006.13.1457) as > part of an MSc project in Bioinformatics at Imperial College (London). > > I have looked at biojava to see if the implementation of this algorithm > already exists and it didn't (a simple search for "fjoin" returns no > results) so after I implemented it I thought I'd submit it and maybe spare a > few hours development to someone else (or in the true open source spirit > someone might find a bug or improve this). > > Is this possible and how do I go about moving this forward (I did have a > read through the website, and could find anythign related to submission). > > Any pointers would be greatly appreciated. > > Keep up the Good Work, > Jean-Paul Ebejer, Malta. > _______________________________________________ > Biojava-l mailing list - [email protected] > http://lists.open-bio.org/mailman/listinfo/biojava-l _________________________ CONFIDENTIALITY NOTICE The information contained in this e-mail message is intended only for the exclusive use of the individual or entity named above and may contain information that is privileged, confidential or exempt from disclosure under applicable law. If the reader of this message is not the intended recipient, or the employee or agent responsible for delivery of the message to the intended recipient, you are hereby notified that any dissemination, distribution or copying of this communication is strictly prohibited. If you have received this communication in error, please notify the sender immediately by e-mail and delete the material from any computer. Thank you. _______________________________________________ Biojava-l mailing list - [email protected] http://lists.open-bio.org/mailman/listinfo/biojava-l
