Dear Sir, I would like to work on this module.
How can I help? Regards, Jitesh Dundas On 4/19/10, Andreas Prlic <[email protected]> wrote: > Hi Richard, > > I am forwarding your message to the mailing list, since that is the best > place to meet other people interested in genetics application. > > The BioJava source code is available via anonymous svn or the download page > on the wiki. > > Andreas > > ---------- Forwarded message ---------- > From: Finkers, Richard <[email protected]> > Date: Sat, Apr 17, 2010 at 12:46 AM > Subject: RE: Biojava3-genetics > To: Andreas Prlic <[email protected]> > > > Hi Andreas, > > To start with, associations with e.g. sequence variation (454) and phenotype > data within larger sets of genetically different individuals. This will be > code which I will have to write the coming year for one of my projects. I am > planning to use this in combination the sequence and phylogeny based biojava > modules. > > I also might consider migrating some of my current code to this module. This > includes graphical representations of genetic data but also some statistical > analysis for which we use the package R for the calculations but the rest of > the data handling / formatting is done in Java. > > Some of the functionality, that I am thinking about, is available from other > packages but I did not find the (java) source code. > > Richard > > > > > -----Original Message----- > From: [email protected] on behalf of Andreas Prlic > Sent: Fri 2010-04-16 19:39 > To: Finkers, Richard > Cc: [email protected] > Subject: Re: Biojava3-genetics > > Hi Richard, > > any contribution is welcome. What do you have in mind in particular? Perhaps > there is already something there along those lines... > > Andreas > > On Thu, Apr 15, 2010 at 11:43 PM, Richard Finkers <[email protected] >>wrote: > >> Dear List, >> >> I would be interested in adding a module for genetic analysis to the >> biojava3 project. Are there others who are interested in this as well and >> with who should I discuss this further? >> >> Thanks, >> Richard >> >> >> -- >> Dr. Richard Finkers >> Researcher Plant Breeding >> Wageningen UR Plant Breeding >> P.O. Box 16, 6700 AA, Wageningen, The Netherlands >> Wageningen Campus, Building 107, Droevendaalsesteeg 1, 6708 PB >> Wageningen, The Netherlands >> Tel. +31-317-484165 Fax +31-317-418094 >> http://www.plantbreeding.wur.nl/ <http://www.plantbreeding.wur.nl> >> https://www.eu-sol.wur.nl/ <https://www.eu-sol.wur.nl> >> https://cbsgdbase.wur.nl/ <https://cbsgdbase.wur.nl> >> http://solgenomics.wur.nl/ <http://solgenomics.wur.nl> >> http://www.disclaimer-uk.wur.nl/ >> >> > > > -- > ----------------------------------------------------------------------- > Dr. Andreas Prlic > Senior Scientist, RCSB PDB Protein Data Bank > University of California, San Diego > (+1) 858.246.0526 > ----------------------------------------------------------------------- > > > > > > -- > ----------------------------------------------------------------------- > Dr. Andreas Prlic > Senior Scientist, RCSB PDB Protein Data Bank > University of California, San Diego > (+1) 858.246.0526 > ----------------------------------------------------------------------- > _______________________________________________ > Biojava-l mailing list - [email protected] > http://lists.open-bio.org/mailman/listinfo/biojava-l > _______________________________________________ Biojava-l mailing list - [email protected] http://lists.open-bio.org/mailman/listinfo/biojava-l
