Can you try with sun-java, rather than openjdk? A
On Tue, Jul 24, 2012 at 9:15 AM, Tony Power <[email protected]> wrote: > Hi again, > > Sorry about the lack of details. > Here it goes: > Debian testing; > Biojava from debian repository; > OpenJDK 7 (installed from debian rep too); > > Thanks, > > On Tue, Jul 24, 2012 at 4:19 PM, Andreas Prlic <[email protected]> wrote: >> Thanks for the feedback. It works in my environments, but it might have to >> do with the conversion of JSON->Java object. >> >> - How did you get your biojava setup? Maven? manually? >> - If manual setup, are you using net.sf.json-lib v. 2.3? >> - What is your operating system and java version? >> >> Thanks, >> >> Andreas >> >> >> On Tue, Jul 24, 2012 at 3:09 AM, Tony Power <[email protected]> wrote: >>> >>> Hi all, >>> >>> When I am trying to run the demo at: >>> http://biojava.org/wiki/BioJava:CookBook3:HmmerService >>> >>> I get the following error: >>> >>> java.lang.ClassCastException: java.lang.Long cannot be cast to >>> java.lang.Integer >>> # Domain ACC Start End eValue >>> Description >>> at >>> org.biojava3.ws.hmmer.RemoteHmmerScan.scan(RemoteHmmerScan.java:119) >>> at >>> org.biojava3.ws.hmmer.RemoteHmmerScan.scan(RemoteHmmerScan.java:42) >>> >>> I have BioJava 3.0.4. >>> >>> Thanks, >>> Tony >>> _______________________________________________ >>> Biojava-l mailing list - [email protected] >>> http://lists.open-bio.org/mailman/listinfo/biojava-l >> >> >> _______________________________________________ Biojava-l mailing list - [email protected] http://lists.open-bio.org/mailman/listinfo/biojava-l
