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• Re: [Biojava-l] bj 3.0.5 vs 3.0.4 Ryan Golhar
• [Biojava-l] biojava 3.0.5 released Andreas Prlic
• [Biojava-l] new feature - CATH parser Andreas Prlic
• [Biojava-l] biojava 3.0.5 release plan Andreas Prlic
• [Biojava-l] access to qualities Tony Power
  • Re: [Biojava-l] access to qualities Tony Power
  • Re: [Biojava-l] access to qualities Tony Power
  • Re: [Biojava-l] access to qualities Michael Heuer
  • Re: [Biojava-l] access to qualities Michael Heuer
  • Re: [Biojava-l] access to qualities Tony Power
  • Re: [Biojava-l] [Biojava-dev] access to qualities Andreas Prlic
• [Biojava-l] Stockholm Parser is on Biojava 3.0.5 SNAPSHOT Amr AL-HOSSARY
  • Re: [Biojava-l] Stockholm Parser is on Biojava 3.0.5 SNAPSHOT Andreas Prlic
  • Re: [Biojava-l] [Biojava-dev] Stockholm Parser is on Biojava 3.0.5 SNAPSHOT Amr AL-HOSSARY
• [Biojava-l] open-bio servers moving Andreas Prlic
• Re: [Biojava-l] Biojava-l Digest, Vol 117, Issue 10 Khalil El Mazouari
• [Biojava-l] regex performance in Java Hilmar Lapp
  • Re: [Biojava-l] regex performance in Java Andreas Prlic
  • Re: [Biojava-l] regex performance in Java Tiago Antão
  • Re: [Biojava-l] regex performance in Java daniel . quest
  • [Biojava-l] Fwd: regex performance in Java P. Troshin
  • Re: [Biojava-l] regex performance in Java Hilmar Lapp
  • Re: [Biojava-l] regex performance in Java P. Troshin
  • Re: [Biojava-l] regex performance in Java P. Troshin
  • Re: [Biojava-l] regex performance in Java P. Troshin
  • Re: [Biojava-l] regex performance in Java Hilmar Lapp
  • Re: [Biojava-l] regex performance in Java daniel . quest
• [Biojava-l] [Job] Lead Web Architect - RCSB PDB Peter Rose
• [Biojava-l] International Symposium on Biomedical Data Infrastructure (BDI 2013) Amandeep Sidhu
• Re: [Biojava-l] Biojava Dependency on Forester Andreas Prlic
  • Re: [Biojava-l] Biojava Dependency on Forester Andreas Prlic
  • Re: [Biojava-l] Biojava Dependency on Forester Scooter Willis
  • Re: [Biojava-l] Biojava Dependency on Forester Scooter Willis
  • Re: [Biojava-l] Biojava Dependency on Forester Mark Chapman
  • Re: [Biojava-l] Biojava Dependency on Forester Andreas Prlic
  • Re: [Biojava-l] Biojava Dependency on Forester Scooter Willis
• [Biojava-l] Fwd: [Announce] Call for Proposals for Doc Sprint Summit v2.0 Hilmar Lapp
• Re: [Biojava-l] InstabilityIndex Andreas Prlic
  • Re: [Biojava-l] InstabilityIndex Steve Darnell
  • Re: [Biojava-l] InstabilityIndex Andreas Prlic
  • Re: [Biojava-l] InstabilityIndex Chuan Hock Koh
• [Biojava-l] maven + genbank parser Daniel Quest
  • Re: [Biojava-l] maven + genbank parser Andreas Prlic
• [Biojava-l] Error when parsing genbank files Hedwig Kurka
• [Biojava-l] OBO parser SHARANYA RAGHUNATH
• Re: [Biojava-l] [Biojava-dev] Problem converting ab1 to fastq files in Biojava 1.8 Nick England
  • Re: [Biojava-l] [Biojava-dev] Problem converting ab1 to fastq files in Biojava 1.8 Andy Yates
• [Biojava-l] new features and git Andreas Prlic
• Re: [Biojava-l] issues with mailman ralf
  • Re: [Biojava-l] issues with mailman [email protected]
  • Re: [Biojava-l] issues with mailman Peter Cock
• [Biojava-l] new BioJava paper published Andreas Prlic
  • Re: [Biojava-l] new BioJava paper published Tony Power
  • Re: [Biojava-l] [Biojava-dev] new BioJava paper published Jim Procter
• [Biojava-l] Are there EJB entities for BioSQL? Jan T Kim
  • Re: [Biojava-l] Are there EJB entities for BioSQL? Andreas Prlic
  • Re: [Biojava-l] Are there EJB entities for BioSQL? Jan T Kim
  • Re: [Biojava-l] Are there EJB entities for BioSQL? Andreas Prlic
• [Biojava-l] should biojava svn be moved to github ? Andreas Prlic
  • Re: [Biojava-l] should biojava svn be moved to github ? Hannes Brandstätter-Müller
  • Re: [Biojava-l] should biojava svn be moved to github ? daniel . quest
  • Re: [Biojava-l] should biojava svn be moved to github ? Michael Heuer
  • Re: [Biojava-l] should biojava svn be moved to github ? Peter Cock
  • Re: [Biojava-l] should biojava svn be moved to github ? Michael Heuer
  • Re: [Biojava-l] should biojava svn be moved to github ? Andreas Prlic
  • Re: [Biojava-l] should biojava svn be moved to github ? Micha
  • Re: [Biojava-l] should biojava svn be moved to github ? Andreas Prlic
  • Re: [Biojava-l] should biojava svn be moved to github ? Andreas Prlic
  • Re: [Biojava-l] should biojava svn be moved to github ? Michael Heuer
  • Re: [Biojava-l] should biojava svn be moved to github ? Spencer Bliven
  • Re: [Biojava-l] should biojava svn be moved to github ? Spencer Bliven
• [Biojava-l] Interested in working on BioJava Amritpal Kallu
  • Re: [Biojava-l] Interested in working on BioJava Andreas Prlic
• [Biojava-l] error on hmmer demo Tony Power
  • Re: [Biojava-l] error on hmmer demo Andreas Prlic
  • Re: [Biojava-l] error on hmmer demo Tony Power
  • Re: [Biojava-l] error on hmmer demo Andreas Prlic
  • Re: [Biojava-l] error on hmmer demo Tony Power
  • Re: [Biojava-l] error on hmmer demo Andreas Prlic
• Re: [Biojava-l] biojava Chain Andreas Prlic
• [Biojava-l] reading fasta file out of memory error Haluk Dogan
  • Re: [Biojava-l] reading fasta file out of memory error Daniel Asarnow
  • Re: [Biojava-l] reading fasta file out of memory error Mic
  • Re: [Biojava-l] reading fasta file out of memory error Scooter Willis
• [Biojava-l] RichSequence.IOTools.writeGenbank - dateCreated Khalil El Mazouari
• [Biojava-l] how to set date created on RichSequence Khalil El Mazouari
  • Re: [Biojava-l] how to set date created on RichSequence George Waldon
  • Re: [Biojava-l] how to set date created on RichSequence Khalil El Mazouari
• Re: [Biojava-l] Biojava Testing and Documentation Andreas Prlic
• [Biojava-l] What are the main pending issues or new features to be added to the BioJava? trematodeo
  • Re: [Biojava-l] What are the main pending issues or new features to be added to the BioJava? Andreas Prlic
• [Biojava-l] BioJava 3.0.4 released Andreas Prlic
• [Biojava-l] biojava and Java version Andreas Prlic
  • Re: [Biojava-l] biojava and Java version Steve Darnell
  • Re: [Biojava-l] biojava and Java version Andreas Prlic
  • Re: [Biojava-l] biojava and Java version Mic
  • Re: [Biojava-l] biojava and Java version Steve Darnell
  • Re: [Biojava-l] biojava and Java version Steve Darnell
  • Re: [Biojava-l] biojava and Java version LAW Andy
  • Re: [Biojava-l] biojava and Java version simon rayner
  • Re: [Biojava-l] biojava and Java version Spencer Bliven
  • Re: [Biojava-l] biojava and Java version Andreas Prlic
  • Re: [Biojava-l] biojava and Java version Spencer Bliven
• [Biojava-l] read fasta entry by entry Mic
  • Re: [Biojava-l] read fasta entry by entry Scooter Willis
  • [Biojava-l] Fwd: read fasta entry by entry P. Troshin
  • Re: [Biojava-l] Fwd: read fasta entry by entry Andreas Prlic
  • Re: [Biojava-l] Fwd: read fasta entry by entry P. Troshin
• [Biojava-l] Similarity measures for generalized sequences Oliver Schmitt
  • Re: [Biojava-l] Similarity measures for generalized sequences Andreas Prlic
• [Biojava-l] Support of VCF, GTF, etc Ryan Golhar
  • Re: [Biojava-l] Support of VCF, GTF, etc Ryan Golhar
  • Re: [Biojava-l] Support of VCF, GTF, etc daniel . quest
• Re: [Biojava-l] [Biojava-dev] GSoC 2012 Peter Cock
• [Biojava-l] Google Summer of Code mentors Robert Buels
• [Biojava-l] BioJava Legacy 1.8.2 released Michael Heuer
• [Biojava-l] Suggestion for porting GHMM library Dhruv Sharma
  • Re: [Biojava-l] Suggestion for porting GHMM library Andreas Prlic
  • Re: [Biojava-l] Suggestion for porting GHMM library Scooter Willis
  • Re: [Biojava-l] Suggestion for porting GHMM library Dhruv Sharma
  • Re: [Biojava-l] Suggestion for porting GHMM library Andreas Prlic
• [Biojava-l] GSoC Application Discussion and Help - Porting BLAST to Java Dhruv Sharma
  • Re: [Biojava-l] GSoC Application Discussion and Help - Porting BLAST to Java Andreas Prlic
• [Biojava-l] Interested in the "cloudization" of BioJava Arthur Oviedo
  • Re: [Biojava-l] Interested in the "cloudization" of BioJava Andreas Prlic
  • Re: [Biojava-l] Interested in the "cloudization" of BioJava Arthur Oviedo
  • Re: [Biojava-l] Interested in the "cloudization" of BioJava Andreas Prlic
  • Re: [Biojava-l] Interested in the "cloudization" of BioJava Mic
• [Biojava-l] WORLDCOMP and Hamid Arabnia Xixun Wu
• Re: [Biojava-l] [Biojava-dev] GSoC - BioJava File Parsers question Andreas Prlic
• [Biojava-l] GSOC New File Parsers for BioJava project coding exercise submission deadline change(!) P. Troshin
• [Biojava-l] GSCO 2012: New File Parsers for BioJava Mihaiu Nick
  • Re: [Biojava-l] GSCO 2012: New File Parsers for BioJava Andreas Prlic
  • Re: [Biojava-l] GSCO 2012: New File Parsers for BioJava P. Troshin
• Re: [Biojava-l] [Biojava-dev] Port an Algorithm to Java Andreas Prlic
  • Re: [Biojava-l] [Biojava-dev] Port an Algorithm to Java Andreas Prlic
  • Re: [Biojava-l] [Biojava-dev] Port an Algorithm to Java Amr AL-Hossary
  • Re: [Biojava-l] [Biojava-dev] Port an Algorithm to Java Andreas Prlic
  • Re: [Biojava-l] [Biojava-dev] Port an Algorithm to Java Amr AL-Hossary
  • Re: [Biojava-l] [Biojava-dev] Port an Algorithm to Java Andreas Prlic
  • Re: [Biojava-l] [Biojava-dev] Port an Algorithm to Java Andreas Prlic
  • Re: [Biojava-l] [Biojava-dev] Port an Algorithm to Java P. Troshin
  • Re: [Biojava-l] [Biojava-dev] Port an Algorithm to Java Andreas Prlic
  • Re: [Biojava-l] [Biojava-dev] Port an Algorithm to Java Andreas Prlic
• Re: [Biojava-l] Project @ Google Summer of Code 2012 Andreas Prlic
• [Biojava-l] AbstractSequence#getUserCollection() Spencer Bliven
• [Biojava-l] Porting an Algorithm to Java GSoC 2012 Shashank Gupta
  • Re: [Biojava-l] Porting an Algorithm to Java GSoC 2012 Andreas Prlic
  • Re: [Biojava-l] Porting an Algorithm to Java GSoC 2012 Russ Kepler
  • Re: [Biojava-l] Porting an Algorithm to Java GSoC 2012 Scooter Willis
  • Re: [Biojava-l] Porting an Algorithm to Java GSoC 2012 Amr AL-Hossary
  • Re: [Biojava-l] Porting an Algorithm to Java GSoC 2012 Shashank Gupta
• [Biojava-l] GSoC 2012 - how to get started with your proposals Andreas Prlic
• [Biojava-l] GSoC 2012- Port an Algorithm to Java Ritisha Laungani
  • Re: [Biojava-l] GSoC 2012- Port an Algorithm to Java Spencer Bliven
  • Re: [Biojava-l] GSoC 2012- Port an Algorithm to Java Hannes Brandstätter-Müller
  • Re: [Biojava-l] GSoC 2012- Port an Algorithm to Java Andreas Prlic
  • Re: [Biojava-l] GSoC 2012- Port an Algorithm to Java Steve Darnell
  • Re: [Biojava-l] GSoC 2012- Port an Algorithm to Java Andreas Prlic
• [Biojava-l] BioJava 3.0.3 released Andreas Prlic
• [Biojava-l] BioJava at at Google Summer of Code 2012 Andreas Prlic
• [Biojava-l] GSOC 2012 superrubiroyd
  • Re: [Biojava-l] GSOC 2012 Andreas Prlic
• [Biojava-l] World's biggest fake conference in computer science James Allen
• [Biojava-l] Interested in working with BioJava for GSoC 2012 Komal Sanjeev
  • Re: [Biojava-l] Interested in working with BioJava for GSoC 2012 Andreas Prlic
  • Re: [Biojava-l] Interested in working with BioJava for GSoC 2012 Komal Sanjeev
  • Re: [Biojava-l] Interested in working with BioJava for GSoC 2012 Amr AL-Hossary
  • Re: [Biojava-l] Interested in working with BioJava for GSoC 2012 Komal Sanjeev
  • Re: [Biojava-l] Interested in working with BioJava for GSoC 2012 Hannes Brandstätter-Müller
  • Re: [Biojava-l] Interested in working with BioJava for GSoC 2012 Amr AL-Hossary
• [Biojava-l] From : Chromatagraph reading in BioJava3? Hannes Brandstätter-Müller
• [Biojava-l] Chromatagraph reading in BioJava3? Nick England
  • Re: [Biojava-l] Chromatagraph reading in BioJava3? Andreas Prlic
  • Re: [Biojava-l] Chromatagraph reading in BioJava3? Nick England
  • Re: [Biojava-l] Chromatagraph reading in BioJava3? Andreas Prlic
  • Re: [Biojava-l] Chromatagraph reading in BioJava3? Michael Heuer
  • Re: [Biojava-l] Chromatagraph reading in BioJava3? Andreas Prlic
  • Re: [Biojava-l] Chromatagraph reading in BioJava3? Nick England
  • Re: [Biojava-l] Chromatagraph reading in BioJava3? Nick England
  • Re: [Biojava-l] Chromatagraph reading in BioJava3? Hannes Brandstätter-Müller
• Re: [Biojava-l] Biojava-l Digest, Vol 110, Issue 2 Muhammad Tariq Pervez
• [Biojava-l] BioJava 3.0.3. release plan Andreas Prlic
• Re: [Biojava-l] Biojava3 pairwise aligner result is different emboss' needle Andreas Prlic
• [Biojava-l] Google Summer of code preparations Andreas Prlic
• [Biojava-l] How to get guide tree,root MSA and lineage file Muhammad Tariq Pervez
  • Re: [Biojava-l] How to get guide tree,root MSA and lineage file Andreas Prlic
• [Biojava-l] Parsing exception reading sequence from GenbankRichSequenceDB Scott Frees
  • Re: [Biojava-l] Parsing exception reading sequence from GenbankRichSequenceDB George Waldon
  • Re: [Biojava-l] Parsing exception reading sequence from GenbankRichSequenceDB Scott Frees
  • Re: [Biojava-l] Parsing exception reading sequence from GenbankRichSequenceDB George Waldon
  • Re: [Biojava-l] Parsing exception reading sequence from GenbankRichSequenceDB Scott Frees
  • Re: [Biojava-l] Parsing exception reading sequence from GenbankRichSequenceDB George Waldon
• [Biojava-l] Google Summer of Code 2012 Andreas Prlic
• [Biojava-l] Only 10 days left to register for DAS Workshop 2012 Jonathan Warren
• [Biojava-l] Fastq benchmark Mic
  • Re: [Biojava-l] Fastq benchmark Scooter Willis
  • Re: [Biojava-l] Fastq benchmark Michael Heuer
• [Biojava-l] compare sequences Mic
  • Re: [Biojava-l] compare sequences Peter Cock

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