On Wed, 30 Aug 2006, John Harwell wrote:
> Marco,
>
> As Volkmar points out, Caret is built on a 32-bit machine.
>
> Is there a "/usr/lib32" or "/usr/X11R6/lib32" directory on your computer?
> When we used Silicon Graphics computers (running their version of UNIX called
> IRIX), it contained both /usr/lib32 and /usr/lib64 so that both 32 and 64 bit
> executables could be used. I don't know if this is how Linux is setup.
Under SuSE (and probably also on Marcos machine, as far as I understand
the ldd output), 32-bit libraries are in /lib, /usr/lib ... whereas their
64-bit equivalents are stored in /lib64 ...
Volkmar
>
> You may want to try the website for your version of Linux to inquire about
> obtaining 32-bit libraries. RedHat has info at "http://
> www.redhat.com/magazine/009jul05/features/multilib/".
>
> ----------------------------------------------------------
> John Harwell
> [EMAIL PROTECTED]
> 314-362-3467
>
> Department of Anatomy and Neurobiology
> Washington University School of Medicine
> 660 S. Euclid Ave. Box 8108
> St. Louis, MO 63110 USA
>
> On Aug 30, 2006, at 8:44 AM, Volkmar Glauche wrote:
>
> > Dear Marco & others,
> >
> > it appears that your caret5 is a 32-bit executable. At least it is for my
> > binary 5.3 distribution.
> >
> > file caret5
> >
> > should tell you what your system thinks of the binary format, and the ldd
> > output suggests that only 32-bit libraries are used. To use this binary
> > as it is, you will have to install the whole bunch of 32-bit shared
> > libraries it needs. Or go and recompile, but then you will need to
> > install
> > the development files for these libraries.
> >
> > Volkmar
> >
> > On Wed, 30 Aug 2006, Marco Tettamanti wrote:
> >
> > > Hi Donna and John,
> > > thank you for your answers! Unfortunately I couldn't solve the
> > > problem.
> > >
> > > I have tried exporting /usr/lib64 to LD_LIBRARY_PATH, but I still get
> > > the same error message:
> > > "error while loading shared libraries: libpng12.so.0: cannot open
> > > shared object file: No such file or directory"
> > >
> > > The output of ldd caret5 is:
> > >
> > > [EMAIL PROTECTED] bin]# ldd caret5
> > > linux-gate.so.1 => (0xffffe000)
> > > libpng12.so.0 => not found
> > > libSM.so.6 => not found
> > > libICE.so.6 => not found
> > > libXi.so.6 => not found
> > > libXrender.so.1 => not found
> > > libXrandr.so.2 => not found
> > > libXcursor.so.1 => not found
> > > libfreetype.so.6 => not found
> > > libfontconfig.so.1 => not found
> > > libXext.so.6 => not found
> > > libX11.so.6 => not found
> > > libz.so.1 => not found
> > > libpthread.so.0 => /lib/tls/libpthread.so.0 (0xf7fdb000)
> > > libdl.so.2 => /lib/libdl.so.2 (0xf7fd7000)
> > > libGLU.so.1 => not found
> > > libGL.so.1 => /usr/lib/libGL.so.1 (0xf7f51000)
> > > libm.so.6 => /lib/tls/libm.so.6 (0xf7f2e000)
> > > libc.so.6 => /lib/tls/libc.so.6 (0x00669000)
> > > /lib/ld-linux.so.2 (0x00650000)
> > > libGLcore.so.1 => /usr/lib/libGLcore.so.1 (0xf776c000)
> > > libnvidia-tls.so.1 => /usr/lib/tls/libnvidia-tls.so.1
> > > (0xf776a000)
> > > libXext.so.6 => not found
> > > libX11.so.6 => not found
> > >
> > > I have tried creating a symolic link to the existing /usr/lib64/
> > > libpng12.so.0 both in the /lib and /usr/lib directories, but I still
> > > get the same error message.
> > > Permissions and file integrity should all be ok.
> > >
> > > Do you have any other suggestions?
> > > Thank you a lot!
> > > Marco
> > >
> > >
> > >
> > > Marco Tettamanti wrote:
> > >
> > >
> > > */Donna Dierker <[EMAIL PROTECTED]>/* wrote:
> > >
> > > Date: Tue, 29 Aug 2006 08:47:13 -0500
> > > From: Donna Dierker <[EMAIL PROTECTED]>
> > > To: "Caret, SureFit, and SuMS software users"
> > > <caret-users@brainvis.wustl.edu>
> > > Subject: Re: [caret-users] [SPAM] caret on AMD64
> > >
> > > Try making sure /usr/lib64 is in your LD_LIBRARY_PATH variable,
> > > e.g.:
> > >
> > > setenv LD_LIBRARY_PATH /usr/lib64:$LD_LIBRARY_PATH
> > >
> > > ... or if your shell is bash:
> > >
> > > export LD_LIBRARY_PATH=/usr/lib64:$LD_LIBRARY_PATH
> > >
> > > Thanks for reporting the issue with the mailing list. It sounds
> > > like I
> > > need to check the spam settings for caret-
> > > [EMAIL PROTECTED]
> > >
> > > On 08/29/2006 03:01 AM, Marco Tettamanti wrote:
> > > > Dear Donna and John,
> > > > first of all I would like to express my congratulations for the
> > > > improvements you made in Caret! I haven't been using the software
> > > > for
> > > > some times, but now that I have some new data to work on and I
> > > > have
> > > > started to use the latest release (5.4), I find that many options
> > > have
> > > > been made more intuitive and easy to use, especially for the
> > > > manual
> > > > correction of segmentation errors.
> > > >
> > > > I am trying to install caret on an an AMD64 linux architecture
> > > (CentOS
> > > > 4.3, kernel 2.6.9, 2 x AMD Opteron dual-core).
> > > > I have tried installing from the linux binaries, but I receive an
> > > error
> > > > message that some libraries cannot be opened ("error while
> > > > loading
> > > > shared libraries: libpng12.so.0: cannot open shared object file:
> > > No such
> > > > file or directory"), even if I create symbolic links to e.g.
> > > > /usr/lib64/libpng12.so.0.
> > > > Is there any way I can get the caret binaries to work on AMD64,
> > > without
> > > > having to build from the source files?
> > > >
> > > > Thank you a lot for your help,
> > > > Marco
> > > >
> > > > P.S.: I am using this alternative email address because but I
> > > > have
> > > > tried several times to send an email to
> > > caret-users@brainvis.wustl.edu
> > > > from my address [EMAIL PROTECTED], but for some reasons my
> > > > emails are rejected with the following error message:
> > > >
> > > > The Symantec Mail Security program
> > > >
> > > > : host
> > > > acuda.wustl.edu[128.252.248.242] said:
> > > > 550 : Sender address rejected: Blocked (in reply
> > > > to RCPT TO command)
> > >
> > >
> >
> > --
> > Volkmar Glauche
> > -
> > Department of Neurology [EMAIL PROTECTED]
> > Universitaetsklinikum Freiburg Phone 49(0)761-270-5331
> > Breisacher Str. 64 Fax 49(0)761-270-5416
> > 79106 Freiburg
> > _______________________________________________
> > caret-users mailing list
> > caret-users@brainvis.wustl.edu
> > http://pulvinar.wustl.edu/mailman/listinfo/caret-users
>
> _______________________________________________
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> caret-users@brainvis.wustl.edu
> http://pulvinar.wustl.edu/mailman/listinfo/caret-users
>
>
--
Volkmar Glauche
-
Department of Neurology [EMAIL PROTECTED]
Universitaetsklinikum Freiburg Phone 49(0)761-270-5331
Breisacher Str. 64 Fax 49(0)761-270-5416
79106 Freiburg
