Thank you Volkmar and John!
Volkmar is right, I have both /usr/lib and /usr/X11R6/lib directories on my
machine. But I have almost exclusively 64bit libraries installed, no 32 bit
libraries.
This was actually my original question: whether there was a mean to install
Caret on a full 64bit machine, without having to compile from the source
files...
Given that this is not the case, I may go on and install the full set of 32 bit
libraries.
Does anyone know the name of the packages that need to be installed in CentOS,
e.g. by using the command 'yum', in order to obtain all the libraries required
by Caret?
Thank you again,
Marco
John Harwell <[EMAIL PROTECTED]> wrote: Marco,
As Volkmar points out, Caret is built on a 32-bit machine.
Is there a "/usr/lib32" or "/usr/X11R6/lib32" directory on your
computer? When we used Silicon Graphics computers (running their
version of UNIX called IRIX), it contained both /usr/lib32 and /usr/
lib64 so that both 32 and 64 bit executables could be used. I don't
know if this is how Linux is setup.
You may want to try the website for your version of Linux to inquire
about obtaining 32-bit libraries. RedHat has info at "http://
www.redhat.com/magazine/009jul05/features/multilib/".
----------------------------------------------------------
John Harwell
[EMAIL PROTECTED]
314-362-3467
Department of Anatomy and Neurobiology
Washington University School of Medicine
660 S. Euclid Ave. Box 8108
St. Louis, MO 63110 USA
On Aug 30, 2006, at 8:44 AM, Volkmar Glauche wrote:
> Dear Marco & others,
>
> it appears that your caret5 is a 32-bit executable. At least it is
> for my
> binary 5.3 distribution.
>
> file caret5
>
> should tell you what your system thinks of the binary format, and
> the ldd
> output suggests that only 32-bit libraries are used. To use this
> binary
> as it is, you will have to install the whole bunch of 32-bit shared
> libraries it needs. Or go and recompile, but then you will need to
> install
> the development files for these libraries.
>
> Volkmar
>
> On Wed, 30 Aug 2006, Marco Tettamanti wrote:
>
>> Hi Donna and John,
>> thank you for your answers! Unfortunately I couldn't solve the
>> problem.
>>
>> I have tried exporting /usr/lib64 to LD_LIBRARY_PATH, but I still
>> get the same error message:
>> "error while loading shared libraries: libpng12.so.0: cannot open
>> shared object file: No such file or directory"
>>
>> The output of ldd caret5 is:
>>
>> [EMAIL PROTECTED] bin]# ldd caret5
>> linux-gate.so.1 => (0xffffe000)
>> libpng12.so.0 => not found
>> libSM.so.6 => not found
>> libICE.so.6 => not found
>> libXi.so.6 => not found
>> libXrender.so.1 => not found
>> libXrandr.so.2 => not found
>> libXcursor.so.1 => not found
>> libfreetype.so.6 => not found
>> libfontconfig.so.1 => not found
>> libXext.so.6 => not found
>> libX11.so.6 => not found
>> libz.so.1 => not found
>> libpthread.so.0 => /lib/tls/libpthread.so.0 (0xf7fdb000)
>> libdl.so.2 => /lib/libdl.so.2 (0xf7fd7000)
>> libGLU.so.1 => not found
>> libGL.so.1 => /usr/lib/libGL.so.1 (0xf7f51000)
>> libm.so.6 => /lib/tls/libm.so.6 (0xf7f2e000)
>> libc.so.6 => /lib/tls/libc.so.6 (0x00669000)
>> /lib/ld-linux.so.2 (0x00650000)
>> libGLcore.so.1 => /usr/lib/libGLcore.so.1 (0xf776c000)
>> libnvidia-tls.so.1 => /usr/lib/tls/libnvidia-tls.so.1
>> (0xf776a000)
>> libXext.so.6 => not found
>> libX11.so.6 => not found
>>
>> I have tried creating a symolic link to the existing /usr/lib64/
>> libpng12.so.0 both in the /lib and /usr/lib directories, but I
>> still get the same error message.
>> Permissions and file integrity should all be ok.
>>
>> Do you have any other suggestions?
>> Thank you a lot!
>> Marco
>>
>>
>>
>> Marco Tettamanti wrote:
>>
>>
>> */Donna Dierker /* wrote:
>>
>> Date: Tue, 29 Aug 2006 08:47:13 -0500
>> From: Donna Dierker
>> To: "Caret, SureFit, and SuMS software users"
>>
>> Subject: Re: [caret-users] [SPAM] caret on AMD64
>>
>> Try making sure /usr/lib64 is in your LD_LIBRARY_PATH
>> variable, e.g.:
>>
>> setenv LD_LIBRARY_PATH /usr/lib64:$LD_LIBRARY_PATH
>>
>> ... or if your shell is bash:
>>
>> export LD_LIBRARY_PATH=/usr/lib64:$LD_LIBRARY_PATH
>>
>> Thanks for reporting the issue with the mailing list. It
>> sounds like I
>> need to check the spam settings for caret-
>> [EMAIL PROTECTED]
>>
>> On 08/29/2006 03:01 AM, Marco Tettamanti wrote:
>>> Dear Donna and John,
>>> first of all I would like to express my congratulations for the
>>> improvements you made in Caret! I haven't been using the software
>>> for
>>> some times, but now that I have some new data to work on and I have
>>> started to use the latest release (5.4), I find that many options
>> have
>>> been made more intuitive and easy to use, especially for the manual
>>> correction of segmentation errors.
>>>
>>> I am trying to install caret on an an AMD64 linux architecture
>> (CentOS
>>> 4.3, kernel 2.6.9, 2 x AMD Opteron dual-core).
>>> I have tried installing from the linux binaries, but I receive an
>> error
>>> message that some libraries cannot be opened ("error while loading
>>> shared libraries: libpng12.so.0: cannot open shared object file:
>> No such
>>> file or directory"), even if I create symbolic links to e.g.
>>> /usr/lib64/libpng12.so.0.
>>> Is there any way I can get the caret binaries to work on AMD64,
>> without
>>> having to build from the source files?
>>>
>>> Thank you a lot for your help,
>>> Marco
>>>
>>> P.S.: I am using this alternative email address because but I have
>>> tried several times to send an email to
>> caret-users@brainvis.wustl.edu
>>> from my address [EMAIL PROTECTED], but for some reasons my
>>> emails are rejected with the following error message:
>>>
>>> The Symantec Mail Security program
>>>
>>> : host
>>> acuda.wustl.edu[128.252.248.242] said:
>>> 550 : Sender address rejected: Blocked (in reply
>>> to RCPT TO command)
>>
>>
>
> --
> Volkmar Glauche
> -
> Department of Neurology [EMAIL PROTECTED]
> Universitaetsklinikum Freiburg Phone 49(0)761-270-5331
> Breisacher Str. 64 Fax 49(0)761-270-5416
> 79106 Freiburg
> _______________________________________________
> caret-users mailing list
> caret-users@brainvis.wustl.edu
> http://pulvinar.wustl.edu/mailman/listinfo/caret-users
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