Hello,

 

I'm a completely fresh novice learning how to use Caret 5.5.

 

I was wondering if anyone could give me some advice on the following,
please...

 

I have a single whole-brain T2-weighted structural MRI dataset acquired
in a post-mortem macaque brain. My dataset is in Analyze format.

 

How can I register/deform my individual macaque dataset to the F99
dataset so that I can then parcellate the temporal lobe according to the
probabilistic atlases available in CARET_TUTORIAL_SEPT06\MACAQUE?

 

If I should use FLIRT in FSL to do the registration then

how can I get the F99 dataset in Analyze-format to do the registration,
and

what options are suggested to be chosen in FLIRT to get the best
registration results?

 

I look forward to receiving your kind advice.

 

Thanking you in anticipation.

 

Hamied

 

________________________________________________

 

 Hamied Ahmad Haroon   PhD  AMInstP

 Research Associate in MR Neuroimaging

 Division of Imaging Science and Biomedical Engineering

 Faculty of Medical and Human Sciences

 The University of Manchester

 Room G.603 Stopford Building, Oxford Road,

 Manchester   M13 9PT

 England, United Kingdom

 Tel: +44 (0)161 275 6871   Fax: +44 (0)161 275 5145

________________________________________________

 

 

 

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