I have a question regarding Caret and monkey atlas. I apologize for
the basic nature of these questions, but I am a newbie to Caret and
that is all i have to say in my defense!!!
We have T1 weighted 0.5 isotropic resolution anatomical images of
monkey brain. The final aim is to be able to reconstruct surfaces as
well as find the co-ordinates of points of interest w.r.t our
stereotaxic coord system. We are working with the inter-aural
Ideally, apart from viewing the surface , we will need stereotaxic
coordinates to know exactly where the AP0 is, mediolateral
I have ,as per the Caret segmentation tutorial, segmented the volume
and created the surfaces. But, the way i have done it, the volume has
been centered at the AC (as per the tutorial instructions). What
should I do to center it to the inter-aural origin? is there any
caret documentation on this... if yes, could you please point me to
them? Consequently what would be the next steps I should perform
(perhaps registration?) to be able to read off the stereo-coords of
interest as per my coordinate system? Please do point me to the
appropriate tutorials/spec files that i may need.
Thanks in advance!!