Hello Matt,

There is not a way to add cells to volume slices in Caret.

You can draw borders (Layers Menu->Borders->Draw Borders) on volume slices and 
then use Layers Menu->Borders->Convert Volume Borders to Fiducial Borders.  
There is also an option Layers Menu->Borders->Convert Volume Borders to 
Fiducial Cells but there appears to be a glitch as the the cell's structure is 
not set properly.  However, if you save the Cell Projection File and then load 
it, the cells appear on the surface.

John


On Jun 16, 2010, at 11:16 AM, R. Matthew Hutchison wrote:

> Hi Caret users, 
> 
> When using the contour drawing feature, it is possible to add cells directly 
> onto the contours that can be later displayed on the reconstructed hemisphere 
> and converted to borders.
> 
> Is it possible to do this using the standard available volume? I want to be 
> able to add cells (to identify specific cortical areas) by clicking on the 
> segmentation line of the MRI image. Please see attached figure for 
> clarification. 
> 
> The goal is to then use the cells to draw the border and create paint file 
> for display.
> 
> It seems most of the options in the tutorials involve selecting areas on the 
> surface itself.
> 
> Thank you for any help or advice.
> 
> Cheers, 
> 
> R. Matt Hutchison 
> 
> 
> -- 
> R. Matthew Hutchison, PhD. Candidate
> Centre for Functional and Metabolic Mapping
> Robarts Research Institute
> Cuddy Wing - 9.4T Suite
> P.O. Box 5015, 100 Perth Drive
> London, Ontario, Canada  N6A 5K8
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