Mike,
You are correct that in caret5, a projected border is displayed on all surfaces
viewed in whatever window is open (i.e., no L-to-L, R-to-R). So you will need
to generate separate scenes for L and R hemisphere views.
John's development version of caret6 already enables multiple surfaces to be
viewed in one window, and 'structure-specific' borders to be displayed on each
surface. That's the good news. However, caret6 (soon to morph into Connectome
Workbench) is still some ways from being released, so you'll have to wait a
while to capitalize on this feature.
David
On Jan 12, 2011, at 2:44 PM, Michael Harms wrote:
>
> That gave me a file that I could save, but when I did that first for the
> L hemi, it appears to have eliminated the R hemi borders. I had the L
> hemi in the Main window, and the R hemi displayed in Window 2. When I
> initially created the borders, I did that in the Main window for both L
> and R, and then when I switched Window 2, everything worked out
> correctly hemisphere-wise, even though there is no "Apply L-to-L, R-to-
> R" matching option available under the Border menus in D/C.
>
> Perhaps I was being too ambitious in trying to get L and R borders
> displayed simultaneously as part of separate L and R windows of the same
> scene? Is that possible? If not, I'm guessing the work-around is to
> just create separate L and R scenes?
>
> thanks,
> -MH
>
>
> On Wed, 2011-01-12 at 13:20 -0600, Donna Dierker wrote:
>> Mike,
>>
>> Try projecting the borders, if they weren't already projected (Layers:
>> Borders: Project, making sure the inflated is in the main window). Then
>> try saving as a borderproj.
>>
>> You should be able to save as either, but the border will only be
>> visible on the reference surface (inflated).
>>
>> I'm not sure this will solve it, but it's easy to try.
>>
>> Donna
>>
>> On 01/12/2011 11:58 AM, Michael Harms wrote:
>>> Hello,
>>> What is the proper way to save border information, so that it can be
>>> reloaded as part of a scene?
>>>
>>> I've created some borders ("Create borders from paint regions"), and
>>> under "Manage Loaded Files" I see an entry for "Border-Inflated", but no
>>> option to save it. I tried saving it via "Save Data File", which indeed
>>> created a .border file, but when I attempt to exit Caret, I still get
>>> the message:
>>>
>>>
>>> Are you sure that you want to quit?
>>> Changes to these files will be lost:
>>> PALS_B12.BOTH-HEMS.STANDARD-SCENES.73730.spec has modified files:
>>> Border File for Surface
>>> Human.PALS_B12.RIGHT_AVG_B1-12.INFLATED.clean.73730.coord
>>>
>>> even though "Manage Loaded Files" doesn't indicate any modified files...
>>>
>>> thanks,
>>> -MH
>>>
>>>
>>
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