See inline replies.
On Aug 17, 2011, at 2:24 PM, Colin Reveley wrote:
> There's a pipeline from freesurfer to caret and ve has put in summs db a doc
> and data sets about to register a freesurfer surface to f99.
>
> Im interested in using afni suma and freesurfer more.
>
> But what I need is to move metric data from f99 to a surface made
> (originally) in freesurfer.
>
I haven't done this, but it might be possible to save the metric file as a
GIFTI func.gii file?
> I understand it is hard even to make monkey surfaces in fs.
>
But you said "about to register a freesurfer surface to F99" -- suggesting the
surface already exists. It's much easier to register a surface that exists
already than to segment one, too.
> But does anyone have any tips? Experiences from the caret freesurfer human
> pipeline?
>
I have experience from the Freesurfer-to-Caret pipeline (human). I've adapted
the preborder.sh import part. Skipped downsampling, depth generation, and
auto-landmark part, though, because this really is oriented to humans.
> "Don't bother" is one tip.
>
This really isn't so scary, from the sound of it.
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