Sure:  If you've got a simple t-test, then caret_stats can help.  But you won't 
find caret_stats in your Caret distribution.  I can package it up for you 
tomorrow.  It runs on java.  I have had problems with multiple java runtime 
engines in the past.  A coworker found a much improved JRE that manages memory 
better.  If you find your TFCE grinds to a halt after a certain number of 
iterations (2900, in my case, but I had 8Gb memory), look for a better JRE.

The optimal JRE is very platform-specific and beyond the scope of my help, but 
if you don't have one, then you'll need to get one.


On Mar 29, 2012, at 3:00 PM, gangli wrote:

> Hi Donna,
> 
> Thanks for your quick and helpful reply. I find the following script in the 
> mail-list http://brainmap.wustl.edu/pub/donna/SCRIPTS/SHAPE/paired.sh. Seems 
> Caret provides all steps for TFCE analysis. May I use this script sample for 
> my purpose? Thanks.
> 
> Regards,
> Gang 
> _______________________________________________
> caret-users mailing list
> [email protected]
> http://brainvis.wustl.edu/mailman/listinfo/caret-users

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