first:

http://brainvis.wustl.edu/CaretHelpAccount/caret5_help/installation/caret5_installation.html

if you installed caret using a package manager, first check in your package
manager that caret_command is installed. It might be a separate package to
caret. Also make sure it's version 5.64 or higher.

if it's not installed then install it. that might fix it straight away.

in general you need to find it and tell your system where to find it.

type

locate caret_command

in your home dir is a file .bash_profile and/or .bashrc

at the end of that file put

export PATH=$PATH:/<the directory where caret_command is>

open a new shell. try it again. this assumes bash is your command shell not
c shell or something.



It's a good idea to  download caret from the website rather than using
packages anyway. put it in a directory like /home/<you>/programs/

unzip it.

then add /home/you/programs/caret/bin to your path as above

and if there is a package version installed, uninstall it or they might get
mixed up.

http://brainvis.wustl.edu/CaretHelpAccount/caret5_help/installation/caret5_installation.html

On 21 June 2013 18:00, <[email protected]> wrote:

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> Today's Topics:
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>    1. caret_command freesurfer_to_fs_LR.sh command not found
>       (wangzhiwei3233)
>
>
> ---------- Forwarded message ----------
> From: wangzhiwei3233 <[email protected]>
> To: <[email protected]>
> Cc:
> Date: Fri, 21 Jun 2013 23:17:24 +0800
> Subject: [caret-users] caret_command freesurfer_to_fs_LR.sh command not
> found
> Hellow caret experts,
> when I run freesurfer_to_fs_LR.sh, there are many "caret_command: command
> not found".
> my operation system: Linux rhel6.2
> I could open caret5 in terminal, but when I run caret_command, the result
> was "command not found".
> what is the problem?
> Thanks!
>
> --
> James Wang
>
>
>
>
>
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