Hi, I am trying to create a surface from a segmentation volume using the command line. The anatomy volume was not segmented with Caret. When I do this:
caret_command -volume-segment "" seg.nii Other.Case.L.spec NNNNNNYYNNNNNNNNN 1 0 NNNNNN LEFT SUREFIT_THEN_GRAPH NIFTI_GZIP I get: VOLUME SEGMENTATION ERROR: Unable to find volume file "RadialPositionMap+orig.*" I also get the same error when using the GUI, Volume -> Segmentation Operations (Surefit) ... But if I use the GUI and use Volume -> Segmentation -> Reconstruct into surface, it works. I'm using Caret 5.65 on OSX 10.8.4. Any ideas why this is happening? Cheers, Tristan
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