Hi Donna, Sure! As I said I'm a newbie to caret, so all I did is very basic. I basically downloaded the Apple Macintosh 64-bit version of Caret v5.65 for my Mac OS 10.8.4 and then I installed it in /Applications/caret
there is a subdirectory called data_files/ there. within the subdirectory, it shows the following subdirectories: CONSTRUCT.SPHERE/ flat_registration/ flatten_borders/ flatten_landmarks/ fmri_mapping_file/ icons/ images/ REGISTER.LVD.SPHERE/ REGISTER.SPHERE/ segmentation/ segmentation_masks/ spherical_registration/ standard_mesh_atlases/ sulcal_identification/ within standard_mesh_atlases/, it shows the following file and subdirectories: atlases.csv Human.PALS.LEFT/ Human.PALS.RIGHT/ within the Human.PALS.RIGHT/ (for example), it shows the following files: ForSPHERICAL.REGISTRATION_Human.Class3.bordercolor Human.colin.RIGHT.RegToPALS_B12.CUTS.CartSTD.clean.73730.topo Human.colin.RIGHT.RegToPALS_B12.FLAT.CartSTD.clean.73730.coord Human.PALS_B12.B1-12.DEPTH_ANALYSES_RIGHT.73730.spec <-- THIS is the one I opened and I cannot see Paint/lobes Human.PALS_B12.R.border_projection_file_94.borderproj Human.PALS_B12.R.preferences_file_0caret5_preferences Human.PALS_B12.RIGHT_AVG_B1-12.FIDUCIAL.clean.align.73730.coord Human.PALS_B12.SPHERE.73730.coord Human.sphere_6.RIGHT_HEM.73730.topo I hope this provides some diagnostic information (maybe?) I will take a look at the file you suggested soon. Thanks a lot for your help! Best, Daniel -- Yung-Jui "Daniel" Yang, PhD Postdoctoral Researcher Yale Child Study Center New Haven, CT (203) 737-5454 On 7/29/13 10:08 AM, "Donna Dierker" <[email protected]<mailto:[email protected]>> wrote: Hi Daniel, Can you send a listing of the directory containing the surfaces you're using? This will tell us not only whether you're using PALS or fs_LR, but also whether you are using caret5-style files or workbench (GIFTI) style files. This file, for example, will work if you've got fs_LR mesh surfaces in caret5 format: parcels-from-pals_composite_29mar11.164k_fs_LR.label.gii.paint http://sumsdb.wustl.edu/sums/archivelist.do?archive_id=8288069 Donna On Jul 28, 2013, at 8:14 PM, "Yang, Daniel" <[email protected]<mailto:[email protected]>> wrote: Hi Caret Experts, After studying the QuickStart tutorials, I am able to display the lobe on the right hemisphere via Paint. However, when I load the standard meshes, there is no lobe information by default. May I ask how do I add lobe information perhaps via Paint? Specific directory / file locations and steps will be much appreciated! Thanks, Daniel -- Yung-Jui "Daniel" Yang, PhD Postdoctoral Researcher Yale Child Study Center New Haven, CT (203) 737-5454 _______________________________________________ caret-users mailing list [email protected]<mailto:[email protected]> http://brainvis.wustl.edu/mailman/listinfo/caret-users _______________________________________________ caret-users mailing list [email protected]<mailto:[email protected]> http://brainvis.wustl.edu/mailman/listinfo/caret-users
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