Hi Eileen, This version of myelin mapping is no longer supported. Please use the HCP Structural Pipelines to create your myelin maps: https://github.com/Washington-University/Pipelines
Thanks, Matt. From: Eileen Moore <[email protected]> Reply-To: "Caret, SureFit, and SuMS software users" <[email protected]> Date: Thursday, December 18, 2014 at 5:50 PM To: <[email protected]> Subject: [caret-users] Myelin Mapping: different number of nodes Hi - I'm trying to run myelin mapping. I've processed my data with FreeSurfer v5.3, applied freesurfer_to_fs_LR.sh, downloaded the Conte69 atlas, and followed all the steps outlined on Caret:Operations/MyelinMapping. I obtained the L.MyelinMapping.metric, R.MyelinMapping.metric, T1wDividedByT2w.nii.gz, and T1wDividedByT2w_ribbon.nii.gz files for a single subject. I'm running into problems when trying to view the myelin map using caret5. I generated a spec file using caret_command -spec-file-create subj1039 both Individual -add-files-in-directory But when I tried to load the MyelinMapping metrics I got an error indicating that the MyelinMapping.metrics have a different number of nodes. I've tried overlaying the myelin map on several surfaces, but I keep getting the different number of nodes error. I'm a new caret user and am at a loss for how to troubleshoot this. I'd appreciate any suggestions. Thanks! _______________________________________________ caret-users mailing list [email protected] http://brainvis.wustl.edu/mailman/listinfo/caret-users
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